Detailed information of evm.model.Ap4.3162 in Astrangia poculata

Genomic Location: Ap4:25201138...25202874
NR annotation: CAB3996135.1, exonuclease 1 isoform X3 [Paramuricea clavata]
Species abbreviation APOCU · all data for this species · gene families


 Gene Structure
More details in JBrowse  Sequence
CDS
Transcript
Protein
 UniProt (Swiss-Prot top hit)
UniProt accessionDescription
Q9W6K2Exonuclease 1 OS=Xenopus laevis OX=8355 GN=exo1 PE=2 SV=1
Q9UQ84Exonuclease 1 OS=Homo sapiens OX=9606 GN=EXO1 PE=1 SV=2
P53695Exodeoxyribonuclease 1 OS=Schizosaccharomyces pombe (strain 972 / ATCC 24843) OX=284812 GN=exo1 PE=1 SV=1
 Gene family
Family typeMembership / link
Orthogroup (gene family)OG0000453 (this species only)

 Pfam domain
Pfam accessionPfam nameDescriptionTypeSource
PF00752
all species →		XPG_NXPG N-terminal domainFamilyInterproscan
PF00867
all species →		XPG_IXPG I-regionFamilyInterproscan

 InterPro
InterPro termTypeDescriptionSource
IPR006086
all species →		DomainXPG-I domainInterproscan
IPR029060
all species →		Homologous_superfamilyPIN-like domain superfamilyInterproscan
IPR006085
all species →		DomainXPG, N-terminalInterproscan
IPR006084
all species →		FamilyXPG/Rad2 endonucleaseInterproscan

 PANTHER
PANTHER termDescriptionSource
PTHR11081
all species →		FLAP ENDONUCLEASE FAMILY MEMBERInterproscan

 Gene Ontology
GO termCategoryDescriptionSource
GO:0004518
all species →		Molecular Functionnuclease activityInterproscan
GO:0017108
all species →		Molecular Function5'-flap endonuclease activityInterproscan

Search by domain instead of by gene. Any accession above (InterPro, Pfam, PANTHER, GO, KEGG) can be used as a query on the Functional Domain Search page, which searches all 148 annotated genomes at once.
 KEGG pathway
No KEGG orthology assignment for evm.model.Ap4.3162.

Searching by KO or pathway ID across all species is available on the KEGG Pathway page.
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