Detailed information of evm.model.Ap4.3776 in Astrangia poculata

Genomic Location: Ap4:28269271...28270041
NR annotation: CAH3152817.1, unnamed protein product [Porites evermanni]
Species Astrangia poculata · all data for this species · gene families


 Gene Structure
More details in JBrowse  Sequence
CDS
Transcript
Protein
 UniProt (Swiss-Prot top hit)
UniProt accessionDescription
Q5UPX0Putative ATP-dependent RNA helicase R290 OS=Acanthamoeba polyphaga mimivirus OX=212035 GN=MIMI_R290 PE=3 SV=1
 Gene family
Family typeMembership / link
Orthogroup (gene family)OG0000285 (this species only)

 Pfam domain
Pfam accessionPfam nameDescriptionTypeSource
PF00271
all species →		Helicase_CHelicase conserved C-terminal domainDomainInterproscan
PF09382
all species →		RQCRQC domainDomainInterproscan

 InterPro
InterPro termTypeDescriptionSource
IPR027417
all species →		Homologous_superfamilyP-loop containing nucleoside triphosphate hydrolaseInterproscan
IPR001650
all species →		DomainHelicase, C-terminal domain-likeInterproscan
IPR036388
all species →		Homologous_superfamilyWinged helix-like DNA-binding domain superfamilyInterproscan
IPR018982
all species →		DomainRQC domainInterproscan

 PANTHER
PANTHER termDescriptionSource
PTHR13710
all species →		DNA HELICASE RECQ FAMILY MEMBERInterproscan

 Gene Ontology
GO termCategoryDescriptionSource
GO:0000724
all species →		Biological Processdouble-strand break repair via homologous recombinationInterproscan
GO:0005634
all species →		Cellular ComponentnucleusInterproscan
GO:0005694
all species →		Cellular ComponentchromosomeInterproscan
GO:0005737
all species →		Cellular ComponentcytoplasmInterproscan
GO:0006268
all species →		Biological ProcessDNA unwinding involved in DNA replicationInterproscan
GO:0006281
all species →		Biological ProcessDNA repairInterproscan
GO:0006310
all species →		Biological ProcessDNA recombinationInterproscan
GO:0009378
all species →		Molecular Functionfour-way junction helicase activityInterproscan
GO:0032508
all species →		Biological ProcessDNA duplex unwindingInterproscan
GO:0043138
all species →		Molecular Function3'-5' DNA helicase activityInterproscan
GO:0006260
all species →		Biological ProcessDNA replicationInterproscan

Search by domain instead of by gene. Any accession above (InterPro, Pfam, PANTHER, GO, KEGG) can be used as a query on the Functional Domain Search page, which searches all 148 annotated genomes at once.
 KEGG pathway
No KEGG orthology assignment for evm.model.Ap4.3776.

Searching by KO or pathway ID across all species is available on the KEGG Pathway page.
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