Detailed information of evm.model.Ap4.3931 in Astrangia poculata

Genomic Location: Ap4:28990499...28991335
NR annotation: CAH3124149.1, unnamed protein product, partial [Pocillopora meandrina]
Species abbreviation APOCU · all data for this species · gene families


 Gene Structure
More details in JBrowse  Sequence
CDS
Transcript
Protein
 UniProt (Swiss-Prot top hit)
No Swiss-Prot hit above the reporting threshold for this gene.
 Gene family
Family typeMembership / link
Orthogroup (gene family)OG0000127 (this species only)

 Pfam domain
Pfam accessionPfam nameDescriptionTypeSource
PF03104
all species →		DNA_pol_B_exo1DNA polymerase family B, exonuclease domainFamilyInterproscan

 InterPro
InterPro termTypeDescriptionSource
IPR006133
all species →		DomainDNA-directed DNA polymerase, family B, exonuclease domainInterproscan
IPR040393
all species →		FamilyThree-prime repair exonuclease 1/2Interproscan
IPR012337
all species →		Homologous_superfamilyRibonuclease H-like superfamilyInterproscan
IPR036397
all species →		Homologous_superfamilyRibonuclease H superfamilyInterproscan
IPR013520
all species →		DomainExonuclease, RNase T/DNA polymerase IIIInterproscan

 PANTHER
PANTHER termDescriptionSource
PTHR13058
all species →		THREE PRIME REPAIR EXONUCLEASE 1, 2Interproscan

 Gene Ontology
GO termCategoryDescriptionSource
GO:0000738
all species →		Biological Processobsolete DNA catabolic process, exonucleolyticInterproscan
GO:0005737
all species →		Cellular ComponentcytoplasmInterproscan
GO:0008296
all species →		Molecular Function3'-5'-DNA exonuclease activityInterproscan
GO:0008408
all species →		Molecular Function3'-5' exonuclease activityInterproscan
GO:0003676
all species →		Molecular Functionnucleic acid bindingInterproscan

Search by domain instead of by gene. Any accession above (InterPro, Pfam, PANTHER, GO, KEGG) can be used as a query on the Functional Domain Search page, which searches all 148 annotated genomes at once.
 KEGG pathway
No KEGG orthology assignment for evm.model.Ap4.3931.

Searching by KO or pathway ID across all species is available on the KEGG Pathway page.
TOP