Detailed information of evm.model.Ap4.4976 in Astrangia poculata

Genomic Location: Ap4:34675241...34680665
NR annotation: XP_020606708.1, SHC SH2 domain-binding protein 1 homolog B-like [Orbicella faveolata]
Species Astrangia poculata · all data for this species · gene families


 Gene Structure
More details in JBrowse  Sequence
CDS
Transcript
Protein
 UniProt (Swiss-Prot top hit)
UniProt accessionDescription
Q8NEM2SHC SH2 domain-binding protein 1 OS=Homo sapiens OX=9606 GN=SHCBP1 PE=1 SV=3
Q640F2SHC SH2 domain-binding protein 1 homolog B OS=Xenopus laevis OX=8355 GN=shcbp1-b PE=2 SV=1
Q6GPE9SHC SH2 domain-binding protein 1 homolog A OS=Xenopus laevis OX=8355 GN=shcbp1-a PE=2 SV=1
 Gene family
Family typeMembership / link
Orthogroup (gene family)OG0008409 (this species only)

 Pfam domain
Pfam accessionPfam nameDescriptionTypeSource
PF13229
all species →		Beta_helixRight handed beta helix regionRepeatInterproscan

 InterPro
InterPro termTypeDescriptionSource
IPR039448
all species →		DomainRight handed beta helix domainInterproscan
IPR045140
all species →		FamilySHC SH2 domain-binding protein 1-likeInterproscan
IPR011050
all species →		Homologous_superfamilyPectin lyase fold/virulence factorInterproscan
IPR006626
all species →		RepeatParallel beta-helix repeatInterproscan
IPR012334
all species →		Homologous_superfamilyPectin lyase foldInterproscan

 PANTHER
PANTHER termDescriptionSource
PTHR14695
all species →		SHC SH2-DOMAIN BINDING PROTEIN 1-RELATEDInterproscan

 Gene Ontology
No Gene Ontology signature was detected for evm.model.Ap4.4976. This gene does have a gene model — the search simply returned no hit.
Search by domain instead of by gene. Any accession above (InterPro, Pfam, PANTHER, GO, KEGG) can be used as a query on the Functional Domain Search page, which searches all 148 annotated genomes at once.
 KEGG pathway
No KEGG orthology assignment for evm.model.Ap4.4976.

Searching by KO or pathway ID across all species is available on the KEGG Pathway page.
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