Detailed information of evm.model.Ap4.5100 in Astrangia poculata

Genomic Location: Ap4:35825834...35863500
NR annotation: XP_020610174.1, pleckstrin homology domain-containing family G member 4B-like isoform X1 [Orbicella faveolata]
Species Astrangia poculata · all data for this species · gene families


 Gene Structure
More details in JBrowse  Sequence
CDS
Transcript
Protein
 UniProt (Swiss-Prot top hit)
UniProt accessionDescription
Q96PX9Pleckstrin homology domain-containing family G member 4B OS=Homo sapiens OX=9606 GN=PLEKHG4B PE=1 SV=5
Q58EX7Puratrophin-1 OS=Homo sapiens OX=9606 GN=PLEKHG4 PE=1 SV=1
Q63406Guanine nucleotide exchange factor DBS OS=Rattus norvegicus OX=10116 GN=Mcf2l PE=1 SV=3
 Gene family
Family typeMembership / link
Orthogroup (gene family)OG0002743 (this species only)

 Pfam domain
Pfam accessionPfam nameDescriptionTypeSource
PF00621
all species →		RhoGEFRhoGEF domainDomainInterproscan
PF13716
all species →		CRAL_TRIO_2Divergent CRAL/TRIO domainDomainInterproscan
PF00837
all species →		T4_deiodinaseIodothyronine deiodinaseFamilyInterproscan
PF00435
all species →		SpectrinSpectrin repeatDomainInterproscan

 InterPro
InterPro termTypeDescriptionSource
IPR000219
all species →		DomainDbl homology (DH) domainInterproscan
IPR018159
all species →		RepeatSpectrin/alpha-actininInterproscan
IPR036865
all species →		Homologous_superfamilyCRAL-TRIO lipid binding domain superfamilyInterproscan
IPR011993
all species →		Homologous_superfamilyPH-like domain superfamilyInterproscan
IPR035899
all species →		Homologous_superfamilyDbl homology (DH) domain superfamilyInterproscan
IPR001251
all species →		DomainCRAL-TRIO lipid binding domainInterproscan
IPR000643
all species →		FamilyIodothyronine deiodinaseInterproscan
IPR052231
all species →		FamilyRho GEF and signaling-related domain-containing proteinInterproscan
IPR001849
all species →		DomainPleckstrin homology domainInterproscan
IPR002017
all species →		RepeatSpectrin repeatInterproscan

 PANTHER
PANTHER termDescriptionSource
PTHR45845
all species →		RHO GUANINE NUCLEOTIDE EXCHANGE FACTOR-RELATEDInterproscan

 Gene Ontology
GO termCategoryDescriptionSource
GO:0005085
all species →		Molecular Functionguanyl-nucleotide exchange factor activityInterproscan
GO:0004800
all species →		Molecular Functionthyroxine 5'-deiodinase activityInterproscan
GO:0005515
all species →		Molecular Functionprotein bindingInterproscan

Search by domain instead of by gene. Any accession above (InterPro, Pfam, PANTHER, GO, KEGG) can be used as a query on the Functional Domain Search page, which searches all 148 annotated genomes at once.
 KEGG pathway
No KEGG orthology assignment for evm.model.Ap4.5100.

Searching by KO or pathway ID across all species is available on the KEGG Pathway page.
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