Detailed information of evm.model.Ap4.5136 in Astrangia poculata

Genomic Location: Ap4:36260654...36261784
NR annotation: CAC5424190.1, unnamed protein product [Mytilus coruscus]
Species Astrangia poculata · all data for this species · gene families


 Gene Structure
More details in JBrowse  Sequence
CDS
Transcript
Protein
 UniProt (Swiss-Prot top hit)
UniProt accessionDescription
P08548LINE-1 reverse transcriptase homolog OS=Nycticebus coucang OX=9470 PE=4 SV=1
 Gene family
Family typeMembership / link
Orthogroup (gene family)OG0000039 (this species only)

 Pfam domain
Pfam accessionPfam nameDescriptionTypeSource
PF03372
all species →		Exo_endo_phosEndonuclease/Exonuclease/phosphatase familyDomainInterproscan

 InterPro
InterPro termTypeDescriptionSource
IPR005135
all species →		DomainEndonuclease/exonuclease/phosphataseInterproscan
IPR036691
all species →		Homologous_superfamilyEndonuclease/exonuclease/phosphatase superfamilyInterproscan
IPR004808
all species →		FamilyAP endonuclease 1Interproscan

 PANTHER
PANTHER termDescriptionSource
PTHR22748
all species →		AP ENDONUCLEASEInterproscan

 Gene Ontology
GO termCategoryDescriptionSource
GO:0003824
all species →		Molecular Functioncatalytic activityInterproscan
GO:0003906
all species →		Molecular FunctionDNA-(apurinic or apyrimidinic site) endonuclease activityInterproscan
GO:0004518
all species →		Molecular Functionnuclease activityInterproscan
GO:0005634
all species →		Cellular ComponentnucleusInterproscan
GO:0006281
all species →		Biological ProcessDNA repairInterproscan
GO:0006284
all species →		Biological Processbase-excision repairInterproscan
GO:0008081
all species →		Molecular Functionphosphoric diester hydrolase activityInterproscan
GO:0008311
all species →		Molecular Functiondouble-stranded DNA 3'-5' DNA exonuclease activityInterproscan

Search by domain instead of by gene. Any accession above (InterPro, Pfam, PANTHER, GO, KEGG) can be used as a query on the Functional Domain Search page, which searches all 148 annotated genomes at once.
 KEGG pathway
No KEGG orthology assignment for evm.model.Ap4.5136.

Searching by KO or pathway ID across all species is available on the KEGG Pathway page.
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