Gene detail

Detailed information of evm.model.Ap4.5213 in Astrangia poculata

Genomic Location: Ap4:36725393...36746064
NR annotation: XP_020610900.1, xaa-Pro aminopeptidase 1-like isoform X2 [Orbicella faveolata]
Species abbreviation APOCU · all data for this species · gene families

Gene Structure

More details in JBrowse

Sequence

CDS

evm.model.Ap4.5213

atggaaaatcggagccttgcgtgcctgggttttgtctgtgtagtgattctgtcgtgctctttcctggtgcactgtagagtgatagaacctgtcatgagccgaagggccgccccagccttgcctgaggtgaacacaactgagcgcctacagaacctacgacaacagatgaaacaaaatggcatccaggcgtacattattccttctgttgaccaacatatgagtgagtacgttgccccacactttcgaagacgccagtacatatccggctttgcgggttccaaaggtgatgcagtcgtaacaatgacgaaggcagcaatgtggaccgatggccggtactatcttcaagctggcatggaaatggatgataactggacgttgatgaaaatggatgacgcaagtactccatcacaagccgaatggttagcaaaggaacttagtaacggcaatacggttggagttgatggacatctcatttccattgctgactacgaggacatgtccaaggaactacaaaagtcaaacattacattgaaaacggtttctgaaaatcttgttgacgcgatatggactgacggcagacctcctatgagtaacgctacgatcttcccgttggaatttaaattcacaggaaagacttgggatgacaaaataaaagatcttcgagacgaaatgacttcaaataaggcgactgcagtcattgtgtacaagcttgatgaagttgcttggctgttgaacttaagaggagccgacgtgccttcaaatcctttctttttcgctttcatcatcgttactaaaagcgaaaccaacgtttacatcgacaaggaaaggttaactcctgaagcaaaggcgcacctgaataaagctattctaaaatcgtacaacacgtctgtttttattgagggcataaaagccgaagaagctaaaagtgatgcgcagatctggttaagcccgtttgccagttacgctatgaaggaagcaattacccaggacaagttattggcaaaagactcgccaatagcactgccgaaatcgattaaaaatccaacagagattaaaggaatgaagaacgctcacctgaaagacaatacggcgatggtagagtttttctactggctgataaatgaggtccgtaaaggaagtaaagacttaacagaaatgtcagcatcagcgaaactagaatatttcaaaagtaaacaagctgactacatggggtatagttttgaaaccatcgcaggttttggccccaatggagctatcattcactacaggccagaaaaaagcacaaacttacggatctttgataacaacacctttcttgttgacagtggatctcagttcaaagatggaacaacagatacaactcgtacagtccactttggaacacctacagcccatcaaaaggatgcttacacccgtattttgaagggtcagatccaactagcactaactgtatttccaaacaatactcaaggtcgtttcttagacaccatcgcgcgtaaagaaatgtggcaaaatggtctggactacaggcatgggacgggacacggaattggaatgtttctcagtgtacacgaaggaccacagaggatagccgcaggttgtccgaagccatgggagaaaccgatagttcctggaatgttccagtcagatgaacccggatattacgaagatggaaactttggcattcgactggaaaccgtgattgtggcagtccctgcgaaaactgaaaacaccttcaatgacaagcagtacgtgacgtttgaagcagtgtcctttgtaccctactggaagagtctgatcgatttggacataatgactcccactgagattgaatggctgaacaactaccacaaacaatgccgagagaaggttggcaaaatgttaaaagatcaggacaaaaacgaagtgtacgactggttggtcgagataactgaaccagttggtcaaaaaggaccggcaccacaagctggtgctgcgtctctcacagtgtctgcagtcatgatgctgcttacagctttgggcttgtttctccgcatgtga

Transcript

evm.model.Ap4.5213

ATGGAAAATCGGAGCCTTGCGTGCCTGGGTTTTGTCTGTGTAGTGATTCTGTCGTGCTCTTTCCTGGTGCACTGTAGAGTGATAGAACCTGTCATGAGCCGAAGGGCCGCCCCAGCCTTGCCTGAGGTGAACACAACTGAGCGCCTACAGAACCTACGACAACAGATGAAACAAAATGGCATCCAGGCGTACATTATTCCTTCTGTTGACCAACATATGAGTGAGTACGTTGCCCCACACTTTCGAAGACGCCAGTACATATCCGGCTTTGCGGGTTCCAAAGGTGATGCAGTCGTAACAATGACGAAGGCAGCAATGTGGACCGATGGCCGGTACTATCTTCAAGCTGGCATGGAAATGGATGATAACTGGACGTTGATGAAAATGGATGACGCAAGTACTCCATCACAAGCCGAATGGTTAGCAAAGGAACTTAGTAACGGCAATACGGTTGGAGTTGATGGACATCTCATTTCCATTGCTGACTACGAGGACATGTCCAAGGAACTACAAAAGTCAAACATTACATTGAAAACGGTTTCTGAAAATCTTGTTGACGCGATATGGACTGACGGCAGACCTCCTATGAGTAACGCTACGATCTTCCCGTTGGAATTTAAATTCACAGGAAAGACTTGGGATGACAAAATAAAAGATCTTCGAGACGAAATGACTTCAAATAAGGCGACTGCAGTCATTGTGTACAAGCTTGATGAAGTTGCTTGGCTGTTGAACTTAAGAGGAGCCGACGTGCCTTCAAATCCTTTCTTTTTCGCTTTCATCATCGTTACTAAAAGCGAAACCAACGTTTACATCGACAAGGAAAGGTTAACTCCTGAAGCAAAGGCGCACCTGAATAAAGCTATTCTAAAATCGTACAACACGTCTGTTTTTATTGAGGGCATAAAAGCCGAAGAAGCTAAAAGTGATGCGCAGATCTGGTTAAGCCCGTTTGCCAGTTACGCTATGAAGGAAGCAATTACCCAGGACAAGTTATTGGCAAAAGACTCGCCAATAGCACTGCCGAAATCGATTAAAAATCCAACAGAGATTAAAGGAATGAAGAACGCTCACCTGAAAGACAATACGGCGATGGTAGAGTTTTTCTACTGGCTGATAAATGAGGTCCGTAAAGGAAGTAAAGACTTAACAGAAATGTCAGCATCAGCGAAACTAGAATATTTCAAAAGTAAACAAGCTGACTACATGGGGTATAGTTTTGAAACCATCGCAGGTTTTGGCCCCAATGGAGCTATCATTCACTACAGGCCAGAAAAAAGCACAAACTTACGGATCTTTGATAACAACACCTTTCTTGTTGACAGTGGATCTCAGTTCAAAGATGGAACAACAGATACAACTCGTACAGTCCACTTTGGAACACCTACAGCCCATCAAAAGGATGCTTACACCCGTATTTTGAAGGGTCAGATCCAACTAGCACTAACTGTATTTCCAAACAATACTCAAGGTCGTTTCTTAGACACCATCGCGCGTAAAGAAATGTGGCAAAATGGTCTGGACTACAGGCATGGGACGGGACACGGAATTGGAATGTTTCTCAGTGTACACGAAGGACCACAGAGGATAGCCGCAGGTTGTCCGAAGCCATGGGAGAAACCGATAGTTCCTGGAATGTTCCAGTCAGATGAACCCGGATATTACGAAGATGGAAACTTTGGCATTCGACTGGAAACCGTGATTGTGGCAGTCCCTGCGAAAACTGAAAACACCTTCAATGACAAGCAGTACGTGACGTTTGAAGCAGTGTCCTTTGTACCCTACTGGAAGAGTCTGATCGATTTGGACATAATGACTCCCACTGAGATTGAATGGCTGAACAACTACCACAAACAATGCCGAGAGAAGGTTGGCAAAATGTTAAAAGATCAGGACAAAAACGAAGTGTACGACTGGTTGGTCGAGATAACTGAACCAGTTGGTCAAAAAGGACCGGCACCACAAGCTGGTGCTGCGTCTCTCACAGTGTCTGCAGTCATGATGCTGCTTACAGCTTTGGGCTTGTTTCTCCGCATGTGA

Protein

UniProt (Swiss-Prot top hit)

UniProt accession	Description
Q9NQW7	Xaa-Pro aminopeptidase 1 OS=Homo sapiens OX=9606 GN=XPNPEP1 PE=1 SV=3
Q6P1B1	Xaa-Pro aminopeptidase 1 OS=Mus musculus OX=10090 GN=Xpnpep1 PE=1 SV=1
O54975	Xaa-Pro aminopeptidase 1 OS=Rattus norvegicus OX=10116 GN=Xpnpep1 PE=1 SV=1

Gene family

Family type	Membership / link
Orthogroup (gene family)	OG0000967 (this species only)

Pfam domain

Pfam accession	Pfam name	Description	Type	Source
PF01321 all species →	Creatinase_N	Creatinase/Prolidase N-terminal domain	Domain	Interproscan
PF00557 all species →	Peptidase_M24	Metallopeptidase family M24	Domain	Interproscan
PF16188 all species →	Peptidase_M24_C	C-terminal region of peptidase_M24	Domain	Interproscan
PF16189 all species →	Creatinase_N_2	Creatinase/Prolidase N-terminal domain	Domain	Interproscan

InterPro

InterPro term	Type	Description	Source
IPR036005 all species →	Homologous_superfamily	Creatinase/aminopeptidase-like	Interproscan
IPR029149 all species →	Homologous_superfamily	Creatinase/Aminopeptidase P/Spt16, N-terminal	Interproscan
IPR000587 all species →	Domain	Creatinase, N-terminal	Interproscan
IPR000994 all species →	Domain	Peptidase M24	Interproscan
IPR033740 all species →	Domain	Aminopeptidase P	Interproscan
IPR050422 all species →	Family	Xaa-Pro aminopeptidase P	Interproscan
IPR032416 all species →	Domain	Peptidase M24, C-terminal domain	Interproscan

PANTHER

PANTHER term	Description	Source
PTHR43763 all species →	XAA-PRO AMINOPEPTIDASE 1	Interproscan

Gene Ontology

GO term	Category	Description	Source
GO:0070006 all species →	Molecular Function	metalloaminopeptidase activity	Interproscan

Search by domain instead of by gene. Any accession above (InterPro, Pfam, PANTHER, GO, KEGG) can be used as a query on the Functional Domain Search page, which searches all 148 annotated genomes at once.

KEGG pathway

KO	Enzyme	Enzyme ID	Pathway	Map ID	Source
K01262	pepP; Xaa-Pro aminopeptidase	EC:3.4.11.9	Peptidases and inhibitors	ko01002	deepkoala

Searching by KO or pathway ID across all species is available on the KEGG Pathway page.