Detailed information of evm.model.Ap4.5280 in Astrangia poculata

Genomic Location: Ap4:37447261...37466363
NR annotation: XP_020600788.1, uncharacterized protein LOC110039944 [Orbicella faveolata]
Species Astrangia poculata · all data for this species · gene families


 Gene Structure
More details in JBrowse  Sequence
CDS
Transcript
Protein
 UniProt (Swiss-Prot top hit)
No Swiss-Prot hit above the reporting threshold for this gene.
 Gene family
Family typeMembership / link
Orthogroup (gene family)OG0001173 (this species only)
Ubiquitin familyULD|UFD/UBQ|UBQ_Other · all ubiquitin genes in this species
Ubiquitin familyULD|UFD/UBQ|UBQ_PIM · all ubiquitin genes in this species

 Pfam domain
Pfam accessionPfam nameDescriptionTypeSource
PF01335
all species →		DEDDeath effector domainDomainInterproscan

 InterPro
InterPro termTypeDescriptionSource
IPR029071
all species →		Homologous_superfamilyUbiquitin-like domain superfamilyInterproscan
IPR001875
all species →		DomainDeath effector domainInterproscan
IPR000626
all species →		DomainUbiquitin-like domainInterproscan
IPR011029
all species →		Homologous_superfamilyDeath-like domain superfamilyInterproscan
IPR051290
all species →		FamilyCASP8 and FADD-like apoptosis regulatorInterproscan

 PANTHER
PANTHER termDescriptionSource
PTHR48169
all species →		DED DOMAIN-CONTAINING PROTEINInterproscan

 Gene Ontology
GO termCategoryDescriptionSource
GO:0005515
all species →		Molecular Functionprotein bindingInterproscan
GO:0042981
all species →		Biological Processregulation of apoptotic processInterproscan

Search by domain instead of by gene. Any accession above (InterPro, Pfam, PANTHER, GO, KEGG) can be used as a query on the Functional Domain Search page, which searches all 148 annotated genomes at once.
 KEGG pathway
No KEGG orthology assignment for evm.model.Ap4.5280.

Searching by KO or pathway ID across all species is available on the KEGG Pathway page.
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