Detailed information of evm.model.Ap4.5350 in Astrangia poculata

Genomic Location: Ap4:38257029...38263564
NR annotation: XP_020613432.1, protein VAC14 homolog [Orbicella faveolata]
Species abbreviation APOCU · all data for this species · gene families


 Gene Structure
More details in JBrowse  Sequence
CDS
Transcript
Protein
 UniProt (Swiss-Prot top hit)
UniProt accessionDescription
Q66L58Protein VAC14 homolog OS=Danio rerio OX=7955 GN=vac14 PE=2 SV=1
Q68F38Protein VAC14 homolog OS=Xenopus laevis OX=8355 GN=vac14 PE=2 SV=1
Q5ZIW5Protein VAC14 homolog OS=Gallus gallus OX=9031 GN=VAC14 PE=2 SV=1
 Gene family
Family typeMembership / link
Orthogroup (gene family)OG0004488 (this species only)

 Pfam domain
Pfam accessionPfam nameDescriptionTypeSource
PF11916
all species →
Vac14_Fig4_bdVacuolar protein 14 C-terminal Fig4p bindingDomainInterproscan

 InterPro
InterPro termTypeDescriptionSource
IPR016024
all species →
Homologous_superfamilyArmadillo-type foldInterproscan
IPR021841
all species →
DomainVacuolar protein 14, C-terminal Fig4-binding domainInterproscan
IPR026825
all species →
FamilyVacuole morphology and inheritance protein 14Interproscan
IPR011989
all species →
Homologous_superfamilyArmadillo-like helicalInterproscan

 PANTHER
PANTHER termDescriptionSource
PTHR16023
all species →
TAX1 BINDING PROTEIN-RELATEDInterproscan

 Gene Ontology
GO termCategoryDescriptionSource
GO:0000306
all species →
Cellular Componentobsolete extrinsic component of vacuolar membraneInterproscan
GO:0006661
all species →
Biological Processphosphatidylinositol biosynthetic processInterproscan
GO:0010008
all species →
Cellular Componentendosome membraneInterproscan
GO:0070772
all species →
Cellular ComponentPAS complexInterproscan

Search by domain instead of by gene. Any accession above (InterPro, Pfam, PANTHER, GO, KEGG) can be used as a query on the Functional Domain Search page, which searches all 148 annotated genomes at once.
 KEGG pathway
No KEGG orthology assignment for evm.model.Ap4.5350.

Searching by KO or pathway ID across all species is available on the KEGG Pathway page.
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