Detailed information of evm.model.Ap4.5497 in Astrangia poculata

Genomic Location: Ap4:39635328...39644008
NR annotation: XP_027037462.1, ras-related protein Rab-2 [Pocillopora damicornis]
Species abbreviation APOCU · all data for this species · gene families


 Gene Structure
More details in JBrowse  Sequence
CDS
Transcript
Protein
 UniProt (Swiss-Prot top hit)
UniProt accessionDescription
Q05975Ras-related protein Rab-2 OS=Lymnaea stagnalis OX=6523 GN=RAB2 PE=2 SV=1
Q90965Ras-related protein Rab-2A OS=Gallus gallus OX=9031 GN=RAB2A PE=2 SV=1
P53994Ras-related protein Rab-2A OS=Mus musculus OX=10090 GN=Rab2a PE=1 SV=1
 Gene family
Family typeMembership / link
Orthogroup (gene family)OG0000048 (this species only)

 Pfam domain
Pfam accessionPfam nameDescriptionTypeSource
PF00071
all species →
RasRas familyDomainInterproscan

 InterPro
InterPro termTypeDescriptionSource
IPR001806
all species →
FamilySmall GTPaseInterproscan
IPR005225
all species →
DomainSmall GTP-binding protein domainInterproscan
IPR027417
all species →
Homologous_superfamilyP-loop containing nucleoside triphosphate hydrolaseInterproscan
IPR050209
all species →
FamilyRab GTPases family involved in membrane traffickingInterproscan

 PANTHER
PANTHER termDescriptionSource
PTHR47979
all species →
DRAB11-RELATEDInterproscan

 Gene Ontology
GO termCategoryDescriptionSource
GO:0003924
all species →
Molecular FunctionGTPase activityInterproscan
GO:0005525
all species →
Molecular FunctionGTP bindingInterproscan
GO:0005794
all species →
Cellular ComponentGolgi apparatusInterproscan
GO:0016192
all species →
Biological Processvesicle-mediated transportInterproscan

Search by domain instead of by gene. Any accession above (InterPro, Pfam, PANTHER, GO, KEGG) can be used as a query on the Functional Domain Search page, which searches all 148 annotated genomes at once.
 KEGG pathway
KOEnzymeEnzyme IDPathwayMap IDSource
K07877RAB2A; Ras-related protein Rab-2A-GTP-binding proteinsko04031deepkoala

Searching by KO or pathway ID across all species is available on the KEGG Pathway page.
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