Gene detail

Detailed information of evm.model.Ap4.5498 in Astrangia poculata

Genomic Location: Ap4:39646810...39652017
NR annotation: XP_020631183.1, ER membrane protein complex subunit 8-like [Orbicella faveolata]
Species Astrangia poculata · all data for this species · gene families

Gene Structure

More details in JBrowse

Sequence

CDS

Transcript

Protein

UniProt (Swiss-Prot top hit)

UniProt accession	Description
Q5FVL2	ER membrane protein complex subunit 8 OS=Rattus norvegicus OX=10116 GN=Emc8 PE=2 SV=1
O70378	ER membrane protein complex subunit 8 OS=Mus musculus OX=10090 GN=Emc8 PE=1 SV=1
Q32KL5	ER membrane protein complex subunit 8 OS=Bos taurus OX=9913 GN=EMC8 PE=2 SV=1

Gene family

Family type	Membership / link
Orthogroup (gene family)	OG0008149 (this species only)

Pfam domain

Pfam accession	Pfam name	Description	Type	Source
PF03665 all species →	UPF0172	Uncharacterised protein family (UPF0172)	Family	Interproscan

InterPro

InterPro term	Type	Description	Source
IPR005366 all species →	Family	ER membrane protein complex subunit 8/9	Interproscan
IPR037518 all species →	Domain	MPN domain	Interproscan

PANTHER

PANTHER term	Description	Source
PTHR12941 all species →	ER MEMBRANE PROTEIN COMPLEX	Interproscan

Gene Ontology

GO term	Category	Description	Source
GO:0072546 all species →	Cellular Component	EMC complex	Interproscan

Search by domain instead of by gene. Any accession above (InterPro, Pfam, PANTHER, GO, KEGG) can be used as a query on the Functional Domain Search page, which searches all 148 annotated genomes at once.

KEGG pathway

KO	Enzyme	Enzyme ID	Pathway	Map ID	Source
K23569	EMC8_9; ER membrane protein complex subunit 8/9	-	Membrane trafficking	ko04131	deepkoala

Searching by KO or pathway ID across all species is available on the KEGG Pathway page.