Gene detail

Detailed information of evm.model.Ap4.5673 in Astrangia poculata

Genomic Location: Ap4:41531686...41544515
NR annotation: CAH3042119.1, unnamed protein product [Pocillopora meandrina]
Species abbreviation APOCU · all data for this species · gene families

Gene Structure

More details in JBrowse

Sequence

CDS

Transcript

Protein

UniProt (Swiss-Prot top hit)

UniProt accession	Description
O74212	Acyl-lipid (8-3)-desaturase OS=Mortierella alpina OX=64518 GN=DES1 PE=1 SV=1
O96099	Acyl-lipid (8-3)-desaturase B OS=Dictyostelium discoideum OX=44689 GN=fadB PE=1 SV=1
Q9Y1W0	Delta(5) fatty acid desaturase A OS=Dictyostelium discoideum OX=44689 GN=fadA PE=1 SV=1

Gene family

Family type	Membership / link
Orthogroup (gene family)	OG0002757 (this species only)

Pfam domain

Pfam accession	Pfam name	Description	Type	Source
PF00173 all species →	Cyt-b5	Cytochrome b5-like Heme/Steroid binding domain	Domain	Interproscan
PF00487 all species →	FA_desaturase	Fatty acid desaturase	Domain	Interproscan

InterPro

InterPro term	Type	Description	Source
IPR012171 all species →	Family	Fatty acid desaturase	Interproscan
IPR001199 all species →	Domain	Cytochrome b5-like heme/steroid binding domain	Interproscan
IPR005804 all species →	Domain	Fatty acid desaturase domain	Interproscan
IPR036400 all species →	Homologous_superfamily	Cytochrome b5-like heme/steroid binding domain superfamily	Interproscan
IPR018506 all species →	Binding_site	Cytochrome b5, heme-binding site	Interproscan

PANTHER

PANTHER term	Description	Source
PTHR19353 all species →	FATTY ACID DESATURASE 2	Interproscan

Gene Ontology

GO term	Category	Description	Source
GO:0006629 all species →	Biological Process	lipid metabolic process	Interproscan
GO:0016020 all species →	Cellular Component	membrane	Interproscan
GO:0016491 all species →	Molecular Function	oxidoreductase activity	Interproscan
GO:0016717 all species →	Molecular Function	oxidoreductase activity, acting on paired donors, with oxidation of a pair of donors resulting in the reduction of molecular oxygen to two molecules of water	Interproscan
GO:0020037 all species →	Molecular Function	heme binding	Interproscan

Search by domain instead of by gene. Any accession above (InterPro, Pfam, PANTHER, GO, KEGG) can be used as a query on the Functional Domain Search page, which searches all 148 annotated genomes at once.

KEGG pathway

KO	Enzyme	Enzyme ID	Pathway	Map ID	Source
K21735	DES5; acyl-lipid (8-3)-desaturase	EC:1.14.19.30	Enzymes with EC numbers	-	deepkoala

Searching by KO or pathway ID across all species is available on the KEGG Pathway page.