Gene detail

Detailed information of evm.model.Ap4.5857 in Astrangia poculata

Genomic Location: Ap4:43232002...43241554
NR annotation: XP_020624195.1, b(0,+)-type amino acid transporter 1-like [Orbicella faveolata]
Species Astrangia poculata · all data for this species · gene families

Gene Structure

More details in JBrowse

Sequence

CDS

Transcript

Protein

UniProt (Swiss-Prot top hit)

UniProt accession	Description
Q7YQK4	Large neutral amino acids transporter small subunit 1 OS=Oryctolagus cuniculus OX=9986 GN=SLC7A5 PE=1 SV=1
Q01650	Large neutral amino acids transporter small subunit 1 OS=Homo sapiens OX=9606 GN=SLC7A5 PE=1 SV=2
Q9QXA6	b(0,+)-type amino acid transporter 1 OS=Mus musculus OX=10090 GN=Slc7a9 PE=1 SV=1

Gene family

Family type	Membership / link
Orthogroup (gene family)	OG0000364 (this species only)

Pfam domain

Pfam accession	Pfam name	Description	Type	Source
PF13520 all species →	AA_permease_2	Amino acid permease	Family	Interproscan

InterPro

InterPro term	Type	Description	Source
IPR050598 all species →	Family	Cellular Amino Acid Transporter	Interproscan
IPR002293 all species →	Family	Amino acid/polyamine transporter I	Interproscan

PANTHER

PANTHER term	Description	Source
PTHR11785 all species →	AMINO ACID TRANSPORTER	Interproscan

Gene Ontology

GO term	Category	Description	Source
GO:0003333 all species →	Biological Process	amino acid transmembrane transport	Interproscan
GO:0015179 all species →	Molecular Function	L-amino acid transmembrane transporter activity	Interproscan
GO:0016020 all species →	Cellular Component	membrane	Interproscan
GO:0022857 all species →	Molecular Function	transmembrane transporter activity	Interproscan
GO:0055085 all species →	Biological Process	transmembrane transport	Interproscan

Search by domain instead of by gene. Any accession above (InterPro, Pfam, PANTHER, GO, KEGG) can be used as a query on the Functional Domain Search page, which searches all 148 annotated genomes at once.

KEGG pathway

KO	Enzyme	Enzyme ID	Pathway	Map ID	Source
K13868	SLC7A9_15, BAT1; solute carrier family 7 (L-type amino acid transporter), member 9/15	-	Transporters	ko02000	deepkoala

Searching by KO or pathway ID across all species is available on the KEGG Pathway page.