Detailed information of evm.model.Ap4.6125 in Astrangia poculata

Genomic Location: Ap4:45568298...45571212
NR annotation: XP_027058738.1, LYR motif-containing protein 4-like [Pocillopora damicornis]
Species abbreviation APOCU · all data for this species · gene families


 Gene Structure
More details in JBrowse  Sequence
CDS
Transcript
Protein
 UniProt (Swiss-Prot top hit)
UniProt accessionDescription
Q8K215LYR motif-containing protein 4 OS=Mus musculus OX=10090 GN=Lyrm4 PE=1 SV=1
B5FZA8LYR motif-containing protein 4 OS=Taeniopygia guttata OX=59729 GN=LYRM4 PE=3 SV=1
Q6DCS1LYR motif-containing protein 4 OS=Xenopus laevis OX=8355 GN=lyrm4 PE=3 SV=1
 Gene family
Family typeMembership / link
Orthogroup (gene family)OG0010700 (this species only)

 Pfam domain
Pfam accessionPfam nameDescriptionTypeSource
PF05347
all species →		Complex1_LYRComplex 1 protein (LYR family)FamilyInterproscan

 InterPro
InterPro termTypeDescriptionSource
IPR051522
all species →		FamilyIron-sulfur cluster assembly LYR proteinInterproscan
IPR008011
all species →		DomainComplex 1 LYR protein domainInterproscan

 PANTHER
PANTHER termDescriptionSource
PTHR13166
all species →		PROTEIN C6ORF149Interproscan

 Gene Ontology
GO termCategoryDescriptionSource
GO:0005739
all species →		Cellular ComponentmitochondrionInterproscan
GO:0016226
all species →		Biological Processiron-sulfur cluster assemblyInterproscan
GO:1990221
all species →		Cellular ComponentL-cysteine desulfurase complexInterproscan

Search by domain instead of by gene. Any accession above (InterPro, Pfam, PANTHER, GO, KEGG) can be used as a query on the Functional Domain Search page, which searches all 148 annotated genomes at once.
 KEGG pathway
No KEGG orthology assignment for evm.model.Ap4.6125.

Searching by KO or pathway ID across all species is available on the KEGG Pathway page.
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