Detailed information of evm.model.Ap4.6193 in Astrangia poculata

Genomic Location: Ap4:46111210...46121585
NR annotation: XP_027047594.1, uncharacterized protein LOC113675246 [Pocillopora damicornis]
Species abbreviation APOCU · all data for this species · gene families


 Gene Structure
More details in JBrowse  Sequence
CDS
Transcript
Protein
 UniProt (Swiss-Prot top hit)
UniProt accessionDescription
Q32P85Dynein light chain roadblock-type 2 OS=Bos taurus OX=9913 GN=DYNLRB2 PE=3 SV=1
Q9DAJ5Dynein light chain roadblock-type 2 OS=Mus musculus OX=10090 GN=Dynlrb2 PE=1 SV=1
Q8TF09Dynein light chain roadblock-type 2 OS=Homo sapiens OX=9606 GN=DYNLRB2 PE=1 SV=1
 Gene family
Family typeMembership / link
Orthogroup (gene family)OG0001152 (this species only)

 Pfam domain
Pfam accessionPfam nameDescriptionTypeSource
PF03259
all species →		Robl_LC7Roadblock/LC7 domainDomainInterproscan

 InterPro
InterPro termTypeDescriptionSource
IPR004942
all species →		DomainRoadblock/LAMTOR2 domainInterproscan

 PANTHER
PANTHER termDescriptionSource
PTHR10779
all species →		DYNEIN LIGHT CHAIN ROADBLOCKInterproscan

 Gene Ontology
GO termCategoryDescriptionSource
GO:0005737
all species →		Cellular ComponentcytoplasmInterproscan
GO:0005813
all species →		Cellular ComponentcentrosomeInterproscan
GO:0005868
all species →		Cellular Componentcytoplasmic dynein complexInterproscan
GO:0007018
all species →		Biological Processmicrotubule-based movementInterproscan
GO:0045505
all species →		Molecular Functiondynein intermediate chain bindingInterproscan

Search by domain instead of by gene. Any accession above (InterPro, Pfam, PANTHER, GO, KEGG) can be used as a query on the Functional Domain Search page, which searches all 148 annotated genomes at once.
 KEGG pathway
KOEnzymeEnzyme IDPathwayMap IDSource
K10419DYNLRB, DNCL2; dynein light chain roadblock-type-Cytoskeleton proteinsko04812deepkoala

Searching by KO or pathway ID across all species is available on the KEGG Pathway page.
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