Genomic Location: Ap4:48213754...48247977
NR annotation: CAH3154388.1, unnamed protein product [Pocillopora meandrina]
Species Astrangia poculata · all data for this species · gene families
| CDS |
| evm.model.Ap4.6371 |
| Transcript |
| evm.model.Ap4.6371 |
| Protein |
| evm.model.Ap4.6371 |
| UniProt accession | Description |
|---|---|
| Q8TEP8 | Centrosomal protein of 192 kDa OS=Homo sapiens OX=9606 GN=CEP192 PE=1 SV=3 |
| Family type | Membership / link |
|---|---|
| Orthogroup (gene family) | OG0002742 (this species only) |
| Pfam accession | Pfam name | Description | Type | Source |
|---|---|---|---|---|
| PF15780 all species → | ASH | Abnormal spindle-like microcephaly-assoc'd, ASPM-SPD-2-Hydin | Domain | Interproscan |
| InterPro term | Type | Description | Source |
|---|---|---|---|
| IPR039103 all species → | Family | Centrosomal protein Spd-2/CEP192 | Interproscan |
| IPR013783 all species → | Homologous_superfamily | Immunoglobulin-like fold | Interproscan |
| IPR031549 all species → | Domain | Abnormal spindle-like microcephaly-associated protein, ASH domain | Interproscan |
| PANTHER term | Description | Source |
|---|---|---|
| PTHR16029 all species → | UNCHARACTERIZED | Interproscan |
| GO term | Category | Description | Source |
|---|---|---|---|
| GO:0000242 all species → | Cellular Component | pericentriolar material | Interproscan |
| GO:0005737 all species → | Cellular Component | cytoplasm | Interproscan |
| GO:0005814 all species → | Cellular Component | centriole | Interproscan |
| GO:0007099 all species → | Biological Process | centriole replication | Interproscan |
| GO:0019901 all species → | Molecular Function | protein kinase binding | Interproscan |
| GO:0051298 all species → | Biological Process | centrosome duplication | Interproscan |
| GO:0071539 all species → | Biological Process | protein localization to centrosome | Interproscan |
| GO:0090222 all species → | Biological Process | centrosome-templated microtubule nucleation | Interproscan |
| GO:0090307 all species → | Biological Process | mitotic spindle assembly | Interproscan |
| KO | Enzyme | Enzyme ID | Pathway | Map ID | Source |
|---|---|---|---|---|---|
| K16725 | CEP192; centrosomal protein CEP192 | - | Chromosome and associated proteins | ko03036 | deepkoala |
Transcript abundance of evm.model.Ap4.6371 across 49 RNA-seq samples of Astrangia poculata. This gene has no row in the species' RNA-seq expression matrix, so every value below is shown as zero — the matrix simply does not cover this transcript. Values are TPM (transcripts per million) from the StringTie quantification; one bar is one sample, grouped and coloured by condition, sorted by expression within each group.
| Condition | Samples | TPM > 0 | Mean TPM | Max TPM | Mean, relative to max |
|---|---|---|---|---|---|
| whole organism · cold control | 14 | 0 | 0.00 | 0.00 | |
| whole organism · heat control | 12 | 0 | 0.00 | 0.00 | |
| whole organism · cold challenge | 12 | 0 | 0.00 | 0.00 | |
| whole organism · heat challenge | 11 | 0 | 0.00 | 0.00 |
Source: CnidoSite RNA-seq expression matrices (APOCU_TPM,
StringTie quantification over 49 runs), joined to SRA sample
metadata. Samples whose tissue/treatment is not recorded in the source metadata are grouped
by the descriptor carried in the expression matrix itself.
