Gene detail

Detailed information of evm.model.Ap4.6398 in Astrangia poculata

Genomic Location: Ap4:48595388...48596149
NR annotation: XP_020609767.1, GTP-binding protein Di-Ras2-like [Orbicella faveolata]
Species Astrangia poculata · all data for this species · gene families

Gene Structure

More details in JBrowse

Sequence

CDS

Transcript

Protein

UniProt (Swiss-Prot top hit)

UniProt accession	Description
Q8MXS1	Ras-related protein Rab-18 OS=Caenorhabditis elegans OX=6239 GN=rab-18 PE=3 SV=1
Q05976	Ras-related protein Rab-18 OS=Lymnaea stagnalis OX=6523 GN=RAB18A PE=2 SV=1
Q55E31	Ras-related protein Rab-32B OS=Dictyostelium discoideum OX=44689 GN=rab32B PE=3 SV=1

Gene family

Family type	Membership / link
Orthogroup (gene family)	OG0001707 (this species only)

Pfam domain

Pfam accession	Pfam name	Description	Type	Source
PF00071 all species →	Ras	Ras family	Domain	Interproscan

InterPro

InterPro term	Type	Description	Source
IPR001806 all species →	Family	Small GTPase	Interproscan
IPR027417 all species →	Homologous_superfamily	P-loop containing nucleoside triphosphate hydrolase	Interproscan
IPR052236 all species →	Family	Small GTPase RasD	Interproscan
IPR005225 all species →	Domain	Small GTP-binding protein domain	Interproscan

PANTHER

PANTHER term	Description	Source
PTHR46149 all species →	MIP08469P	Interproscan

Gene Ontology

GO term	Category	Description	Source
GO:0003924 all species →	Molecular Function	GTPase activity	Interproscan
GO:0005525 all species →	Molecular Function	GTP binding	Interproscan

Search by domain instead of by gene. Any accession above (InterPro, Pfam, PANTHER, GO, KEGG) can be used as a query on the Functional Domain Search page, which searches all 148 annotated genomes at once.

KEGG pathway

No KEGG orthology assignment for evm.model.Ap4.6398.

Searching by KO or pathway ID across all species is available on the KEGG Pathway page.