Gene detail

Detailed information of evm.model.Ap4.6499 in Astrangia poculata

Genomic Location: Ap4:49546356...49561226
NR annotation: KAJ7360574.1, BTB (POZ) domain-containing protein 8 [Desmophyllum pertusum]
Species Astrangia poculata · all data for this species · gene families

Gene Structure

More details in JBrowse

Sequence

CDS

evm.model.Ap4.6499

atgacttctgcgtcctttttaaagagcaaagcttttaaagaaagagaagaaaatgcaagggaaaaggtgcggcaagcggccaaacaagatctggtagcggatttatccagactttttggagatacaacattcagtgatgtgtcatttatagtacgcaattcagaatttcaagctcatacagttgtcctcagagccagagccccaaatttctgtcgacaatttcttccaagacatgcttcaccaattgccgtccaaacatgcatccagataaatggattagaagctgctgagtttgaggcatttctaaggtctgcttatactgaagatgacttcaaggactatgatgaatcaagatatccatggacaaagcagaatgagtcacgctcagtggaaaaaatcaatcatgttattaatggcaatgaattcaaaggagacagtacaagttttcagaatgatgtagatggaactcacattctgtcacataccacccagtctagttgtactgcgcaagatgaaagcgttgcattaactggaccaaatgacccagtagaaactgatcgagatgacgttgcacttacttgcactcattcatactgtgacgtggaaagtgacaattcagaaattgccagcagtgatgccgctggcatggaaaaggttgaaagggcagatcctcatcaaaatgatgataaggaatttgcaactgatatttctgctcatgtatgtgaactcgttgcccaagattcgagtcatcctcatgctgttccctatagtaacatggaacaaactgataattcacttgtaacctgtcagtcccaagaccagacaagtcaggttaatatcaattcagtggttaatggacttgattctatggttgttcaagaaactagaactgtacttgactgtcctcgaggtggatgtgaattaacatgtaaaccacattcaagttgtcgttataatggtctgcctgaaggattaggagcagcagatgcaacaacttctgaaatgactacgactgacgacaaaattgttcaaaacggtttcaaatcagtgcaagatcttgacctgacagtgaatcacattgcacaagataataattataagacatcagagaatgaattagagaggtgctgctgcaatcttggccaagatttactccagttgtttattagtgaggttggaactgatgttgtatttctggtcaatggagacaaagttaaagcacataaagccattctgtgtgcccgttccaattacttctctgctatgctgtatggtgactggattgaagggaaaactaatgagattcctcttattggtgtgaattataatggtttcatgaccatcctgaagtatatctatggaggaacaactcaagtgaagagtgacttagcactcatctgtgatacattaccacttgttgacatgtacggtcttgaagggctgagggaaatcataatctgcactttaaaaatcgacaagtgtcacatgtttcataagccctgcactgaatgtttagttgatgtccctgagtgtttggaagtatctgagctgttcagtcttactgacctaaagaaatcttgcatcaaatggatggccaaacactttgatcgttccctgagcagcaaaggatttgctacccttcctaagcagcttcaggaagaaattctggccgaaattcagagaaaccttgtcatagcatcagctatagaagtcttaaaccactgtgacaaactgtcctcgtgcacaccactggtcaagtggactgagcctgttcacgaggctgtctccactgttcaagaaacatgtctgctgtttgttagtgacaattttttctcattggtcgatgaaaggagctttcatgaaatcctgaagggggtgggttggtctgtgcctgttctggagaaaattctatctgcggtgaaaagaaactttacgattgaaaactgctgtgaccagctaagggccattctcaagttaaaaaagatcattaacctgaagagccaagaggaaggcgaagagggctacccagaagaagtagttgatcttgtggtcaatttacacaatgactgtatcaagttcataagatcgaacctttttaaagttactcgctcagaaggatggaaacgattaaagattgtcacacaacgggaagtaaaggaaggtgccgtgtttagtggcctcggggattcaagagatcgttgtagcggaaaaagaagcgcgccaacttcagcgcaggcttcgagcaagccaccaaccagaagtgctttgcaacgtgctggaactgagtctcgcgctagaggactggggagaggaaacaccgcaactggcggaaatcttaacaagagctctcagcaagagaggccttcctcggctcggagctacccgggtaggactggtcctgcgcctacgaataagcggcctacctcaggacggcccgcatctgcccagagcggtgtaatgtcgggccgtggtaaattgccttcagtctcaaaaagcgccgcttctgaaaacagacctttgtcaactcggatgtctgtagttccaggtagttcaagattgtcttcttcattatcgagagactcagacaagttgttgtgtgttcagagttcttctgcgtcaggacgtgggaaaaaattgtcatcaaatgcaccttctgctcaaagctctggtcagaatacaagaaaaattcactcggcggcatctaacaataaacgaagctctttagcatctcaagagaacacaatcgggaggccttcatctgctgcaagctcttctggggccataagaaaggccccagcagcttccaggccccctctaccgacaggtaatagcagcagtcacttgtcaaagaggttcacaagagaaaagcccctttctgttgtgggttctcgcgtacaatcgaaaatagcacatacgggatccaaagccgtgtctgtcacaaactcgcggcaatgtcgtactaaagaatccaaggcagctacggctttatgtaagccaaacaaggcgtcttcgtcaacagatagcaaaggaacgggcgcgagaaaggaactctttaaaaacacagctaaagaattagatgccagttctggacttgaaagtaaatttgttaccagcttgatagaagaaagtcagtcaagtgaaaatgatagcagtagaacgagagtaacagatgaaaccttggtcaacgaaaatgacagtactcaagctggtgcacaggccaacagccttgaccgcgaagaggctgctcctgtatccacaagcacagaaaacttgcaggaagtttcattactattaagtgaagtggttgacgaggtctgttccaaatcacagtgtgacgattgtccggataacgccaagttcaatgattcactagactaa

Transcript

evm.model.Ap4.6499

ATGACTTCTGCGTCCTTTTTAAAGAGCAAAGCTTTTAAAGAAAGAGAAGAAAATGCAAGGGAAAAGGTGCGGCAAGCGGCCAAACAAGATCTGGTAGCGGATTTATCCAGACTTTTTGGAGATACAACATTCAGTGATGTGTCATTTATAGTACGCAATTCAGAATTTCAAGCTCATACAGTTGTCCTCAGAGCCAGAGCCCCAAATTTCTGTCGACAATTTCTTCCAAGACATGCTTCACCAATTGCCGTCCAAACATGCATCCAGATAAATGGATTAGAAGCTGCTGAGTTTGAGGCATTTCTAAGGTCTGCTTATACTGAAGATGACTTCAAGGACTATGATGAATCAAGATATCCATGGACAAAGCAGAATGAGTCACGCTCAGTGGAAAAAATCAATCATGTTATTAATGGCAATGAATTCAAAGGAGACAGTACAAGTTTTCAGAATGATGTAGATGGAACTCACATTCTGTCACATACCACCCAGTCTAGTTGTACTGCGCAAGATGAAAGCGTTGCATTAACTGGACCAAATGACCCAGTAGAAACTGATCGAGATGACGTTGCACTTACTTGCACTCATTCATACTGTGACGTGGAAAGTGACAATTCAGAAATTGCCAGCAGTGATGCCGCTGGCATGGAAAAGGTTGAAAGGGCAGATCCTCATCAAAATGATGATAAGGAATTTGCAACTGATATTTCTGCTCATGTATGTGAACTCGTTGCCCAAGATTCGAGTCATCCTCATGCTGTTCCCTATAGTAACATGGAACAAACTGATAATTCACTTGTAACCTGTCAGTCCCAAGACCAGACAAGTCAGGTTAATATCAATTCAGTGGTTAATGGACTTGATTCTATGGTTGTTCAAGAAACTAGAACTGTACTTGACTGTCCTCGAGGTGGATGTGAATTAACATGTAAACCACATTCAAGTTGTCGTTATAATGGTCTGCCTGAAGGATTAGGAGCAGCAGATGCAACAACTTCTGAAATGACTACGACTGACGACAAAATTGTTCAAAACGGTTTCAAATCAGTGCAAGATCTTGACCTGACAGTGAATCACATTGCACAAGATAATAATTATAAGACATCAGAGAATGAATTAGAGAGGTGCTGCTGCAATCTTGGCCAAGATTTACTCCAGTTGTTTATTAGTGAGGTTGGAACTGATGTTGTATTTCTGGTCAATGGAGACAAAGTTAAAGCACATAAAGCCATTCTGTGTGCCCGTTCCAATTACTTCTCTGCTATGCTGTATGGTGACTGGATTGAAGGGAAAACTAATGAGATTCCTCTTATTGGTGTGAATTATAATGGTTTCATGACCATCCTGAAGTATATCTATGGAGGAACAACTCAAGTGAAGAGTGACTTAGCACTCATCTGTGATACATTACCACTTGTTGACATGTACGGTCTTGAAGGGCTGAGGGAAATCATAATCTGCACTTTAAAAATCGACAAGTGTCACATGTTTCATAAGCCCTGCACTGAATGTTTAGTTGATGTCCCTGAGTGTTTGGAAGTATCTGAGCTGTTCAGTCTTACTGACCTAAAGAAATCTTGCATCAAATGGATGGCCAAACACTTTGATCGTTCCCTGAGCAGCAAAGGATTTGCTACCCTTCCTAAGCAGCTTCAGGAAGAAATTCTGGCCGAAATTCAGAGAAACCTTGTCATAGCATCAGCTATAGAAGTCTTAAACCACTGTGACAAACTGTCCTCGTGCACACCACTGGTCAAGTGGACTGAGCCTGTTCACGAGGCTGTCTCCACTGTTCAAGAAACATGTCTGCTGTTTGTTAGTGACAATTTTTTCTCATTGGTCGATGAAAGGAGCTTTCATGAAATCCTGAAGGGGGTGGGTTGGTCTGTGCCTGTTCTGGAGAAAATTCTATCTGCGGTGAAAAGAAACTTTACGATTGAAAACTGCTGTGACCAGCTAAGGGCCATTCTCAAGTTAAAAAAGATCATTAACCTGAAGAGCCAAGAGGAAGGCGAAGAGGGCTACCCAGAAGAAGTAGTTGATCTTGTGGTCAATTTACACAATGACTGTATCAAGTTCATAAGATCGAACCTTTTTAAAGTTACTCGCTCAGAAGGATGGAAACGATTAAAGATTGTCACACAACGGGAAGTAAAGGAAGGTGCCGTGTTTAGTGGCCTCGGGGATTCAAGAGATCGTTGTAGCGGAAAAAGAAGCGCGCCAACTTCAGCGCAGGCTTCGAGCAAGCCACCAACCAGAAGTGCTTTGCAACGTGCTGGAACTGAGTCTCGCGCTAGAGGACTGGGGAGAGGAAACACCGCAACTGGCGGAAATCTTAACAAGAGCTCTCAGCAAGAGAGGCCTTCCTCGGCTCGGAGCTACCCGGGTAGGACTGGTCCTGCGCCTACGAATAAGCGGCCTACCTCAGGACGGCCCGCATCTGCCCAGAGCGGTGTAATGTCGGGCCGTGGTAAATTGCCTTCAGTCTCAAAAAGCGCCGCTTCTGAAAACAGACCTTTGTCAACTCGGATGTCTGTAGTTCCAGGTAGTTCAAGATTGTCTTCTTCATTATCGAGAGACTCAGACAAGTTGTTGTGTGTTCAGAGTTCTTCTGCGTCAGGACGTGGGAAAAAATTGTCATCAAATGCACCTTCTGCTCAAAGCTCTGGTCAGAATACAAGAAAAATTCACTCGGCGGCATCTAACAATAAACGAAGCTCTTTAGCATCTCAAGAGAACACAATCGGGAGGCCTTCATCTGCTGCAAGCTCTTCTGGGGCCATAAGAAAGGCCCCAGCAGCTTCCAGGCCCCCTCTACCGACAGGTAATAGCAGCAGTCACTTGTCAAAGAGGTTCACAAGAGAAAAGCCCCTTTCTGTTGTGGGTTCTCGCGTACAATCGAAAATAGCACATACGGGATCCAAAGCCGTGTCTGTCACAAACTCGCGGCAATGTCGTACTAAAGAATCCAAGGCAGCTACGGCTTTATGTAAGCCAAACAAGGCGTCTTCGTCAACAGATAGCAAAGGAACGGGCGCGAGAAAGGAACTCTTTAAAAACACAGCTAAAGAATTAGATGCCAGTTCTGGACTTGAAAGTAAATTTGTTACCAGCTTGATAGAAGAAAGTCAGTCAAGTGAAAATGATAGCAGTAGAACGAGAGTAACAGATGAAACCTTGGTCAACGAAAATGACAGTACTCAAGCTGGTGCACAGGCCAACAGCCTTGACCGCGAAGAGGCTGCTCCTGTATCCACAAGCACAGAAAACTTGCAGGAAGTTTCATTACTATTAAGTGAAGTGGTTGACGAGGTCTGTTCCAAATCACAGTGTGACGATTGTCCGGATAACGCCAAGTTCAATGATTCACTAGACTAA

Protein

UniProt (Swiss-Prot top hit)

UniProt accession	Description
Q9W2S3	BTB/POZ domain-containing protein 9 OS=Drosophila melanogaster OX=7227 GN=BTBD9 PE=1 SV=1
Q717B2	TD and POZ domain-containing protein 2 OS=Mus musculus OX=10090 GN=Tdpoz2 PE=2 SV=2
D2HEW7	Kelch-like protein 22 OS=Ailuropoda melanoleuca OX=9646 GN=KLHL22 PE=3 SV=1

Gene family

Family type	Membership / link
Orthogroup (gene family)	OG0007331 (this species only)
Transcription factor family	ZBTB · all TF in this species
Ubiquitin family	E3\|E3 adaptor Cullin RING\|BTB · all ubiquitin genes in this species

Pfam domain

Pfam accession	Pfam name	Description	Type	Source
PF00651 all species →	BTB	BTB/POZ domain	Domain	Interproscan

InterPro

InterPro term	Type	Description	Source
IPR011333 all species →	Homologous_superfamily	SKP1/BTB/POZ domain superfamily	Interproscan
IPR000210 all species →	Domain	BTB/POZ domain	Interproscan

PANTHER

PANTHER term	Description	Source
PTHR22427 all species →	UNCHARACTERIZED	Interproscan

Gene Ontology

GO term	Category	Description	Source
GO:0005515 all species →	Molecular Function	protein binding	Interproscan

Search by domain instead of by gene. Any accession above (InterPro, Pfam, PANTHER, GO, KEGG) can be used as a query on the Functional Domain Search page, which searches all 148 annotated genomes at once.

KEGG pathway

KO	Enzyme	Enzyme ID	Pathway	Map ID	Source
K10480	BTBD8; BTB/POZ domain-containing protein 8	-	Ubiquitin system	ko04121	deepkoala

Searching by KO or pathway ID across all species is available on the KEGG Pathway page.