Detailed information of evm.model.Ap4.6508 in Astrangia poculata

Genomic Location: Ap4:49686019...49692484
NR annotation: XP_020609564.1, contactin-associated protein-like 2 [Orbicella faveolata]
Species Astrangia poculata · all data for this species · gene families


 Gene Structure
More details in JBrowse  Sequence
CDS
Transcript
Protein
 UniProt (Swiss-Prot top hit)
UniProt accessionDescription
Q94887Neurexin-4 OS=Drosophila melanogaster OX=7227 GN=Nrx-IV PE=1 SV=2
 Gene family
Family typeMembership / link
Orthogroup (gene family)OG0000058 (this species only)

 Pfam domain
Pfam accessionPfam nameDescriptionTypeSource
PF00059
all species →		Lectin_CLectin C-type domainDomainInterproscan
PF12947
all species →		EGF_3EGF domainDomainInterproscan

 InterPro
InterPro termTypeDescriptionSource
IPR036056
all species →		Homologous_superfamilyFibrinogen-like, C-terminalInterproscan
IPR001304
all species →		DomainC-type lectin-likeInterproscan
IPR018097
all species →		Conserved_siteEGF-like calcium-binding, conserved siteInterproscan
IPR002181
all species →		DomainFibrinogen, alpha/beta/gamma chain, C-terminal globular domainInterproscan
IPR024731
all species →		DomainEGF domainInterproscan
IPR018378
all species →		Conserved_siteC-type lectin, conserved siteInterproscan
IPR000742
all species →		DomainEGF-like domainInterproscan
IPR000152
all species →		PTMEGF-type aspartate/asparagine hydroxylation siteInterproscan
IPR016186
all species →		Homologous_superfamilyC-type lectin-like/link domain superfamilyInterproscan
IPR001881
all species →		DomainEGF-like calcium-binding domainInterproscan
IPR050801
all species →		FamilyCalcium-Dependent Lectins in Immunity and DevelopmentInterproscan
IPR016187
all species →		Homologous_superfamilyC-type lectin foldInterproscan

 PANTHER
PANTHER termDescriptionSource
PTHR22801
all species →		LITHOSTATHINEInterproscan

 Gene Ontology
GO termCategoryDescriptionSource
GO:0005509
all species →		Molecular Functioncalcium ion bindingInterproscan

Search by domain instead of by gene. Any accession above (InterPro, Pfam, PANTHER, GO, KEGG) can be used as a query on the Functional Domain Search page, which searches all 148 annotated genomes at once.
 KEGG pathway
No KEGG orthology assignment for evm.model.Ap4.6508.

Searching by KO or pathway ID across all species is available on the KEGG Pathway page.
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