Detailed information of evm.model.Ap4.662 in Astrangia poculata

Genomic Location: Ap4:7040795...7045631
NR annotation: KAJ7381039.1, hypothetical protein OS493_004635 [Desmophyllum pertusum]
Species Astrangia poculata · all data for this species · gene families


 Gene Structure
More details in JBrowse  Sequence
CDS
Transcript
Protein
 UniProt (Swiss-Prot top hit)
UniProt accessionDescription
Q54FB7Xanthine dehydrogenase OS=Dictyostelium discoideum OX=44689 GN=xdh PE=3 SV=1
Q6AUV1Xanthine dehydrogenase OS=Oryza sativa subsp. japonica OX=39947 GN=XDH PE=2 SV=1
Q8GUQ8Xanthine dehydrogenase 1 OS=Arabidopsis thaliana OX=3702 GN=XDH1 PE=1 SV=1
 Gene family
Family typeMembership / link
Orthogroup (gene family)OG0001251 (this species only)

 Pfam domain
Pfam accessionPfam nameDescriptionTypeSource
PF00111
all species →		Fer22Fe-2S iron-sulfur cluster binding domainDomainInterproscan
PF01799
all species →		Fer2_2[2Fe-2S] binding domainDomainInterproscan

 InterPro
InterPro termTypeDescriptionSource
IPR036884
all species →		Homologous_superfamily[2Fe-2S]-binding domain superfamilyInterproscan
IPR016208
all species →		FamilyAldehyde oxidase/xanthine dehydrogenase-likeInterproscan
IPR001041
all species →		Domain2Fe-2S ferredoxin-type iron-sulfur binding domainInterproscan
IPR036010
all species →		Homologous_superfamily2Fe-2S ferredoxin-like superfamilyInterproscan
IPR012675
all species →		Homologous_superfamilyBeta-grasp domain superfamilyInterproscan
IPR002888
all species →		Domain[2Fe-2S]-bindingInterproscan

 PANTHER
PANTHER termDescriptionSource
PTHR45444
all species →		XANTHINE DEHYDROGENASEInterproscan

 Gene Ontology
GO termCategoryDescriptionSource
GO:0005506
all species →		Molecular Functioniron ion bindingInterproscan
GO:0016491
all species →		Molecular Functionoxidoreductase activityInterproscan
GO:0051536
all species →		Molecular Functioniron-sulfur cluster bindingInterproscan
GO:0046872
all species →		Molecular Functionmetal ion bindingInterproscan

Search by domain instead of by gene. Any accession above (InterPro, Pfam, PANTHER, GO, KEGG) can be used as a query on the Functional Domain Search page, which searches all 148 annotated genomes at once.
 KEGG pathway
No KEGG orthology assignment for evm.model.Ap4.662.

Searching by KO or pathway ID across all species is available on the KEGG Pathway page.
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