Gene detail

Detailed information of evm.model.Ap4.6744 in Astrangia poculata

Genomic Location: Ap4:51820210...51830973
NR annotation: XP_020625541.1, uncharacterized protein LOC110062937 [Orbicella faveolata]
Species Astrangia poculata · all data for this species · gene families

Gene Structure

More details in JBrowse

Sequence

CDS

Transcript

Protein

UniProt (Swiss-Prot top hit)

UniProt accession	Description
Q6UB98	Ankyrin repeat domain-containing protein 12 OS=Homo sapiens OX=9606 GN=ANKRD12 PE=1 SV=3
E9Q4F7	Ankyrin repeat domain-containing protein 11 OS=Mus musculus OX=10090 GN=Ankrd11 PE=1 SV=1
Q6UB99	Ankyrin repeat domain-containing protein 11 OS=Homo sapiens OX=9606 GN=ANKRD11 PE=1 SV=3

Gene family

Family type	Membership / link
Orthogroup (gene family)	OG0005938 (this species only)

Pfam domain

Pfam accession	Pfam name	Description	Type	Source
PF12796 all species →	Ank_2	Ankyrin repeats (3 copies)	Repeat	Interproscan

InterPro

InterPro term	Type	Description	Source
IPR053210 all species →	Family	Ankyrin repeat domain-containing protein 12	Interproscan
IPR036770 all species →	Homologous_superfamily	Ankyrin repeat-containing domain superfamily	Interproscan
IPR002110 all species →	Repeat	Ankyrin repeat	Interproscan

PANTHER

PANTHER term	Description	Source
PTHR24149 all species →	ANKYRIN REPEAT DOMAIN-CONTAINING PROTEIN 12	Interproscan

Gene Ontology

GO term	Category	Description	Source
GO:0005654 all species →	Cellular Component	nucleoplasm	Interproscan
GO:0005515 all species →	Molecular Function	protein binding	Interproscan

Search by domain instead of by gene. Any accession above (InterPro, Pfam, PANTHER, GO, KEGG) can be used as a query on the Functional Domain Search page, which searches all 148 annotated genomes at once.

KEGG pathway

No KEGG orthology assignment for evm.model.Ap4.6744.

Searching by KO or pathway ID across all species is available on the KEGG Pathway page.