Detailed information of evm.model.Ap4.6837 in Astrangia poculata

Genomic Location: Ap4:52945938...52952573
NR annotation: KAJ7374532.1, OTU domain-containing protein 6B [Desmophyllum pertusum]
Species Astrangia poculata · all data for this species · gene families


 Gene Structure
More details in JBrowse  Sequence
CDS
Transcript
Protein
 UniProt (Swiss-Prot top hit)
UniProt accessionDescription
Q8K2H2Deubiquitinase OTUD6B OS=Mus musculus OX=10090 GN=Otud6b PE=1 SV=1
Q8N6M0Deubiquitinase OTUD6B OS=Homo sapiens OX=9606 GN=OTUD6B PE=1 SV=1
Q7ZV00Deubiquitinase OTUD6B OS=Danio rerio OX=7955 GN=otud6b PE=2 SV=1
 Gene family
Family typeMembership / link
Orthogroup (gene family)OG0006603 (this species only)
Ubiquitin familyDUB|OTU|OTU · all ubiquitin genes in this species

 Pfam domain
Pfam accessionPfam nameDescriptionTypeSource
PF02338
all species →		OTUOTU-like cysteine proteaseFamilyInterproscan

 InterPro
InterPro termTypeDescriptionSource
IPR003323
all species →		DomainOTU domainInterproscan
IPR049772
all species →		DomainOTU domain-containing protein 6A/6B, ovarian tumor domainInterproscan
IPR050704
all species →		FamilyOTU domain-containing ubiquitin thioesteraseInterproscan
IPR038765
all species →		Homologous_superfamilyPapain-like cysteine peptidase superfamilyInterproscan

 PANTHER
PANTHER termDescriptionSource
PTHR12419
all species →		OTU DOMAIN CONTAINING PROTEINInterproscan

 Gene Ontology
GO termCategoryDescriptionSource
GO:0004843
all species →		Molecular Functioncysteine-type deubiquitinase activityInterproscan
GO:0016579
all species →		Biological Processprotein deubiquitinationInterproscan

Search by domain instead of by gene. Any accession above (InterPro, Pfam, PANTHER, GO, KEGG) can be used as a query on the Functional Domain Search page, which searches all 148 annotated genomes at once.
 KEGG pathway
KOEnzymeEnzyme IDPathwayMap IDSource
K18342OTUD6; OTU domain-containing protein 6EC:3.4.19.12
Ubiquitin systemko04121deepkoala

Searching by KO or pathway ID across all species is available on the KEGG Pathway page.
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