Detailed information of evm.model.Ap4.7044 in Astrangia poculata

Genomic Location: Ap4:55290625...55298071
NR annotation: KAJ7376632.1, ss18, nBAF chromatin remodeling complex subunit [Desmophyllum pertusum]
Species abbreviation APOCU · all data for this species · gene families


 Gene Structure
More details in JBrowse  Sequence
CDS
Transcript
Protein
 UniProt (Swiss-Prot top hit)
UniProt accessionDescription
Q08E31Calcium-responsive transactivator OS=Bos taurus OX=9913 GN=SS18L1 PE=2 SV=1
Q91XJ0Calcium-responsive transcription coactivator OS=Rattus norvegicus OX=10116 GN=Ss18l1 PE=1 SV=1
Q8BW22Calcium-responsive transactivator OS=Mus musculus OX=10090 GN=Ss18l1 PE=1 SV=1
 Gene family
Family typeMembership / link
Orthogroup (gene family)OG0007881 (this species only)

 Pfam domain
Pfam accessionPfam nameDescriptionTypeSource
PF05030
all species →		SSXTSSXT protein (N-terminal region)FamilyInterproscan

 InterPro
InterPro termTypeDescriptionSource
IPR007726
all species →		DomainSS18, N-terminalInterproscan

 PANTHER
No PANTHER signature was detected for evm.model.Ap4.7044. This gene does have a gene model — the search simply returned no hit.
 Gene Ontology
No Gene Ontology signature was detected for evm.model.Ap4.7044. This gene does have a gene model — the search simply returned no hit.
Search by domain instead of by gene. Any accession above (InterPro, Pfam, PANTHER, GO, KEGG) can be used as a query on the Functional Domain Search page, which searches all 148 annotated genomes at once.
 KEGG pathway
No KEGG orthology assignment for evm.model.Ap4.7044.

Searching by KO or pathway ID across all species is available on the KEGG Pathway page.
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