Genomic Location: Ap4:55368343...55390502
NR annotation: XP_020623951.1, 5-oxoprolinase-like [Orbicella faveolata]
Species Astrangia poculata · all data for this species · gene families
| CDS |
| evm.model.Ap4.7052.1.5f15e59b |
| Transcript |
| evm.model.Ap4.7052.1.5f15e59b |
| Protein |
| evm.model.Ap4.7052.1.5f15e59b |
| UniProt accession | Description |
|---|---|
| Q75WB5 | 5-oxoprolinase OS=Bos taurus OX=9913 GN=OPLAH PE=1 SV=2 |
| P97608 | 5-oxoprolinase OS=Rattus norvegicus OX=10116 GN=Oplah PE=1 SV=2 |
| Q8K010 | 5-oxoprolinase OS=Mus musculus OX=10090 GN=Oplah PE=1 SV=1 |
| Family type | Membership / link |
|---|---|
| Orthogroup (gene family) | OG0001799 (this species only) |
| Pfam accession | Pfam name | Description | Type | Source |
|---|---|---|---|---|
| PF02538 all species → | Hydantoinase_B | Hydantoinase B/oxoprolinase | Family | Interproscan |
| PF19278 all species → | Hydant_A_C | Hydantoinase/oxoprolinase C-terminal domain | Domain | Interproscan |
| PF05378 all species → | Hydant_A_N | Hydantoinase/oxoprolinase N-terminal region | Family | Interproscan |
| PF01968 all species → | Hydantoinase_A | Hydantoinase/oxoprolinase | Family | Interproscan |
| InterPro term | Type | Description | Source |
|---|---|---|---|
| IPR045079 all species → | Family | Oxoprolinase family | Interproscan |
| IPR003692 all species → | Domain | Hydantoinase B/oxoprolinase | Interproscan |
| IPR049517 all species → | Domain | Acetophenone carboxylase-like, C-terminal domain | Interproscan |
| IPR008040 all species → | Domain | Hydantoinase/oxoprolinase, N-terminal | Interproscan |
| IPR002821 all species → | Domain | Hydantoinase A/oxoprolinase | Interproscan |
| PANTHER term | Description | Source |
|---|---|---|
| PTHR11365 all species → | 5-OXOPROLINASE RELATED | Interproscan |
| GO term | Category | Description | Source |
|---|---|---|---|
| GO:0005829 all species → | Cellular Component | cytosol | Interproscan |
| GO:0006749 all species → | Biological Process | glutathione metabolic process | Interproscan |
| GO:0016787 all species → | Molecular Function | hydrolase activity | Interproscan |
| GO:0017168 all species → | Molecular Function | 5-oxoprolinase (ATP-hydrolyzing) activity | Interproscan |
| GO:0003824 all species → | Molecular Function | catalytic activity | Interproscan |
| KO | Enzyme | Enzyme ID | Pathway | Map ID | Source |
|---|---|---|---|---|---|
| K01469 | OPLAH, OXP1, oplAH; 5-oxoprolinase (ATP-hydrolysing) | EC:3.5.2.9 | Glutathione metabolism | ko00480 | deepkoala |
Transcript abundance of evm.model.Ap4.7052.1.5f15e59b across 49 RNA-seq samples of Astrangia poculata. This gene has no row in the species' RNA-seq expression matrix, so every value below is shown as zero — the matrix simply does not cover this transcript. Values are TPM (transcripts per million) from the StringTie quantification; one bar is one sample, grouped and coloured by condition, sorted by expression within each group.
| Condition | Samples | TPM > 0 | Mean TPM | Max TPM | Mean, relative to max |
|---|---|---|---|---|---|
| whole organism · cold control | 14 | 0 | 0.00 | 0.00 | |
| whole organism · heat control | 12 | 0 | 0.00 | 0.00 | |
| whole organism · cold challenge | 12 | 0 | 0.00 | 0.00 | |
| whole organism · heat challenge | 11 | 0 | 0.00 | 0.00 |
Source: CnidoSite RNA-seq expression matrices (APOCU_TPM,
StringTie quantification over 49 runs), joined to SRA sample
metadata. Samples whose tissue/treatment is not recorded in the source metadata are grouped
by the descriptor carried in the expression matrix itself.
