Genomic Location: Ap4:55962164...55965383
NR annotation: XP_027037406.1, NADH dehydrogenase [ubiquinone] 1 beta subcomplex subunit 9-like [Pocillopora damicornis]
Species Astrangia poculata · all data for this species · gene families
| CDS |
| evm.model.Ap4.7101 |
| Transcript |
| evm.model.Ap4.7101 |
| Protein |
| evm.model.Ap4.7101 |
| UniProt accession | Description |
|---|---|
| Q02369 | NADH dehydrogenase [ubiquinone] 1 beta subcomplex subunit 9 OS=Bos taurus OX=9913 GN=NDUFB9 PE=1 SV=2 |
| Q0MQE9 | NADH dehydrogenase [ubiquinone] 1 beta subcomplex subunit 9 OS=Gorilla gorilla gorilla OX=9595 GN=NDUFB9 PE=2 SV=3 |
| Q9Y6M9 | NADH dehydrogenase [ubiquinone] 1 beta subcomplex subunit 9 OS=Homo sapiens OX=9606 GN=NDUFB9 PE=1 SV=3 |
| Family type | Membership / link |
|---|---|
| Orthogroup (gene family) | OG0009436 (this species only) |
evm.model.Ap4.7101. This gene does have a gene model — the search simply returned no hit.| InterPro term | Type | Description | Source |
|---|---|---|---|
| IPR045292 all species → | Domain | NDUFB9, LYR domain | Interproscan |
| IPR033034 all species → | Family | NADH dehydrogenase [ubiquinone] 1 beta subcomplex subunit 9 | Interproscan |
| PANTHER term | Description | Source |
|---|---|---|
| PTHR12868 all species → | NADH-UBIQUINONE OXIDOREDUCTASE B22 SUBUNIT | Interproscan |
| GO term | Category | Description | Source |
|---|---|---|---|
| GO:0005747 all species → | Cellular Component | obsolete mitochondrial respiratory chain complex I | Interproscan |
| GO:0006120 all species → | Biological Process | mitochondrial electron transport, NADH to ubiquinone | Interproscan |
| KO | Enzyme | Enzyme ID | Pathway | Map ID | Source |
|---|---|---|---|---|---|
| K03965 | NDUFB9; NADH dehydrogenase (ubiquinone) 1 beta subcomplex subunit 9 | - | Non-alcoholic fatty liver disease | ko04932 | deepkoala |
Transcript abundance of evm.model.Ap4.7101 across 49 RNA-seq samples of Astrangia poculata. This gene has no row in the species' RNA-seq expression matrix, so every value below is shown as zero — the matrix simply does not cover this transcript. Values are TPM (transcripts per million) from the StringTie quantification; one bar is one sample, grouped and coloured by condition, sorted by expression within each group.
| Condition | Samples | TPM > 0 | Mean TPM | Max TPM | Mean, relative to max |
|---|---|---|---|---|---|
| whole organism · cold control | 14 | 0 | 0.00 | 0.00 | |
| whole organism · heat control | 12 | 0 | 0.00 | 0.00 | |
| whole organism · cold challenge | 12 | 0 | 0.00 | 0.00 | |
| whole organism · heat challenge | 11 | 0 | 0.00 | 0.00 |
Source: CnidoSite RNA-seq expression matrices (APOCU_TPM,
StringTie quantification over 49 runs), joined to SRA sample
metadata. Samples whose tissue/treatment is not recorded in the source metadata are grouped
by the descriptor carried in the expression matrix itself.
