Detailed information of evm.model.Ap4.7134 in Astrangia poculata

Genomic Location: Ap4:56235930...56236334
NR annotation: KAJ7374817.1, hypothetical protein OS493_005169 [Desmophyllum pertusum]
Species Astrangia poculata · all data for this species · gene families


 Gene Structure
More details in JBrowse  Sequence
CDS
Transcript
Protein
 UniProt (Swiss-Prot top hit)
No Swiss-Prot hit above the reporting threshold for this gene.
 Gene family
Family typeMembership / link
Orthogroup (gene family)OG0010784 (this species only)

 Pfam domain
Pfam accessionPfam nameDescriptionTypeSource
PF00553
all species →		CBM_2Cellulose binding domainDomainInterproscan

 InterPro
InterPro termTypeDescriptionSource
IPR012291
all species →		Homologous_superfamilyCBM2, carbohydrate-binding domain superfamilyInterproscan
IPR008965
all species →		Homologous_superfamilyCBM2/CBM3, carbohydrate-binding domain superfamilyInterproscan
IPR001919
all species →		DomainCarbohydrate-binding type-2 domainInterproscan

 PANTHER
No PANTHER signature was detected for evm.model.Ap4.7134. This gene does have a gene model — the search simply returned no hit.
 Gene Ontology
GO termCategoryDescriptionSource
GO:0004553
all species →		Molecular Functionhydrolase activity, hydrolyzing O-glycosyl compoundsInterproscan
GO:0030247
all species →		Molecular Functionpolysaccharide bindingInterproscan
GO:0030246
all species →		Molecular Functioncarbohydrate bindingInterproscan
GO:0005975
all species →		Biological Processcarbohydrate metabolic processInterproscan

Search by domain instead of by gene. Any accession above (InterPro, Pfam, PANTHER, GO, KEGG) can be used as a query on the Functional Domain Search page, which searches all 148 annotated genomes at once.
 KEGG pathway
No KEGG orthology assignment for evm.model.Ap4.7134.

Searching by KO or pathway ID across all species is available on the KEGG Pathway page.
TOP