Gene detail

Detailed information of evm.model.Ap4.7150 in Astrangia poculata

Genomic Location: Ap4:56401964...56402551
NR annotation: XP_020616852.1, transcription factor MafB-like [Orbicella faveolata]
Species abbreviation APOCU · all data for this species · gene families

Gene Structure

More details in JBrowse

Sequence

CDS

Transcript

Protein

UniProt (Swiss-Prot top hit)

UniProt accession	Description
Q98UK4	Transcription factor Maf OS=Danio rerio OX=7955 GN=maf PE=1 SV=1
Q789F3	Transcription factor Maf OS=Gallus gallus OX=9031 GN=MAF PE=1 SV=1
O57342	Transcription factor MafA OS=Coturnix japonica OX=93934 GN=MAFA PE=1 SV=1

Gene family

Family type	Membership / link
Orthogroup (gene family)	OG0000830 (this species only)

Pfam domain

Pfam accession	Pfam name	Description	Type	Source
PF03131 all species →	bZIP_Maf	bZIP Maf transcription factor	Coiled-coil	Interproscan

InterPro

InterPro term	Type	Description	Source
IPR024874 all species →	Family	Transcription factor Maf family	Interproscan
IPR008917 all species →	Homologous_superfamily	Transcription factor, Skn-1-like, DNA-binding domain superfamily	Interproscan
IPR004826 all species →	Domain	Basic leucine zipper domain, Maf-type	Interproscan

PANTHER

PANTHER term	Description	Source
PTHR10129 all species →	TRANSCRIPTION FACTOR MAF	Interproscan

Gene Ontology

GO term	Category	Description	Source
GO:0000978 all species →	Molecular Function	RNA polymerase II cis-regulatory region sequence-specific DNA binding	Interproscan
GO:0000981 all species →	Molecular Function	DNA-binding transcription factor activity, RNA polymerase II-specific	Interproscan
GO:0003700 all species →	Molecular Function	DNA-binding transcription factor activity	Interproscan
GO:0005634 all species →	Cellular Component	nucleus	Interproscan
GO:0006355 all species →	Biological Process	regulation of DNA-templated transcription	Interproscan
GO:0006357 all species →	Biological Process	regulation of transcription by RNA polymerase II	Interproscan
GO:0003677 all species →	Molecular Function	DNA binding	Interproscan

Search by domain instead of by gene. Any accession above (InterPro, Pfam, PANTHER, GO, KEGG) can be used as a query on the Functional Domain Search page, which searches all 148 annotated genomes at once.

KEGG pathway

No KEGG orthology assignment for evm.model.Ap4.7150.

Searching by KO or pathway ID across all species is available on the KEGG Pathway page.