Detailed information of evm.model.Ap4.7301 in Astrangia poculata

Genomic Location: Ap4:57830429...57831796
NR annotation: XP_020614825.1, Bardet-Biedl syndrome 10 protein homolog [Orbicella faveolata]
Species Astrangia poculata · all data for this species · gene families


 Gene Structure
More details in JBrowse  Sequence
CDS
Transcript
Protein
 UniProt (Swiss-Prot top hit)
UniProt accessionDescription
P78921Probable T-complex protein 1 subunit theta OS=Schizosaccharomyces pombe (strain 972 / ATCC 24843) OX=284812 GN=cct8 PE=2 SV=3
 Gene family
Family typeMembership / link
Orthogroup (gene family)OG0002319 (this species only)

 Pfam domain
Pfam accessionPfam nameDescriptionTypeSource
PF00118
all species →		Cpn60_TCP1TCP-1/cpn60 chaperonin familyFamilyInterproscan

 InterPro
InterPro termTypeDescriptionSource
IPR027409
all species →		Homologous_superfamilyGroEL-like apical domain superfamilyInterproscan
IPR027413
all species →		Homologous_superfamilyGroEL-like equatorial domain superfamilyInterproscan
IPR002423
all species →		FamilyChaperonin Cpn60/GroEL/TCP-1 familyInterproscan
IPR042619
all species →		FamilyBardet-Biedl syndrome 10 proteinInterproscan
IPR027410
all species →		Homologous_superfamilyTCP-1-like chaperonin intermediate domain superfamilyInterproscan

 PANTHER
PANTHER termDescriptionSource
PTHR14667
all species →		BARDET-BIEDL SYNDROME 10 PROTEINInterproscan

 Gene Ontology
GO termCategoryDescriptionSource
GO:0005524
all species →		Molecular FunctionATP bindingInterproscan
GO:0051131
all species →		Biological Processchaperone-mediated protein complex assemblyInterproscan

Search by domain instead of by gene. Any accession above (InterPro, Pfam, PANTHER, GO, KEGG) can be used as a query on the Functional Domain Search page, which searches all 148 annotated genomes at once.
 KEGG pathway
No KEGG orthology assignment for evm.model.Ap4.7301.

Searching by KO or pathway ID across all species is available on the KEGG Pathway page.
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