Gene detail

Detailed information of evm.model.Ap4.898 in Astrangia poculata

Genomic Location: Ap4:9436809...9439629
NR annotation: XP_027036800.1, AN1-type zinc finger protein 2B-like [Pocillopora damicornis]
Species abbreviation APOCU · all data for this species · gene families

Gene Structure

More details in JBrowse

Sequence

CDS

Transcript

Protein

UniProt (Swiss-Prot top hit)

UniProt accession	Description
Q9SCM4	Zinc finger AN1 and C2H2 domain-containing stress-associated protein 13 OS=Arabidopsis thaliana OX=3702 GN=SAP13 PE=2 SV=1
Q8VZ42	Zinc finger AN1 and C2H2 domain-containing stress-associated protein 11 OS=Arabidopsis thaliana OX=3702 GN=SAP11 PE=2 SV=1

Gene family

Family type	Membership / link
Orthogroup (gene family)	OG0002144 (this species only)

Pfam domain

Pfam accession	Pfam name	Description	Type	Source
PF01428 all species →	zf-AN1	AN1-like Zinc finger	Family	Interproscan

InterPro

InterPro term	Type	Description	Source
IPR035896 all species →	Homologous_superfamily	AN1-like Zinc finger	Interproscan
IPR000058 all species →	Domain	Zinc finger, AN1-type	Interproscan

PANTHER

PANTHER term	Description	Source
PTHR14677 all species →	ARSENITE INDUCUBLE RNA ASSOCIATED PROTEIN AIP-1-RELATED	Interproscan

Gene Ontology

GO term	Category	Description	Source
GO:0005737 all species →	Cellular Component	cytoplasm	Interproscan
GO:0008270 all species →	Molecular Function	zinc ion binding	Interproscan

Search by domain instead of by gene. Any accession above (InterPro, Pfam, PANTHER, GO, KEGG) can be used as a query on the Functional Domain Search page, which searches all 148 annotated genomes at once.

KEGG pathway

KO	Enzyme	Enzyme ID	Pathway	Map ID	Source
K24685	ZFAND2; AN1-type zinc finger protein 2	-	Domain-containing proteins not elsewhere classified	ko04990	deepkoala

Searching by KO or pathway ID across all species is available on the KEGG Pathway page.