Detailed information of evm.model.Ap4.929 in Astrangia poculata

Genomic Location: Ap4:9745566...9765535
NR annotation: KAJ7380904.1, Leucine-rich repeat transmembrane protein flrt2 [Desmophyllum pertusum]
Species Astrangia poculata · all data for this species · gene families


 Gene Structure
More details in JBrowse  Sequence
CDS
Transcript
Protein
 UniProt (Swiss-Prot top hit)
UniProt accessionDescription
P21793Decorin OS=Bos taurus OX=9913 GN=DCN PE=1 SV=2
Q9TTE2Decorin OS=Ovis aries OX=9940 GN=DCN PE=2 SV=1
 Gene family
Family typeMembership / link
Orthogroup (gene family)OG0002899 (this species only)

 Pfam domain
Pfam accessionPfam nameDescriptionTypeSource
PF13306
all species →		LRR_5BspA type Leucine rich repeat region (6 copies)RepeatInterproscan
PF13855
all species →		LRR_8Leucine rich repeatRepeatInterproscan

 InterPro
InterPro termTypeDescriptionSource
IPR032675
all species →		Homologous_superfamilyLeucine-rich repeat domain superfamilyInterproscan
IPR001611
all species →		RepeatLeucine-rich repeatInterproscan
IPR026906
all species →		RepeatBspA-type LRR regionInterproscan
IPR050328
all species →		FamilyMultifunctional Developmental and Immune ReceptorInterproscan
IPR003591
all species →		RepeatLeucine-rich repeat, typical subtypeInterproscan

 PANTHER
PANTHER termDescriptionSource
PTHR24373
all species →		SLIT RELATED LEUCINE-RICH REPEAT NEURONAL PROTEINInterproscan

 Gene Ontology
GO termCategoryDescriptionSource
GO:0005515
all species →		Molecular Functionprotein bindingInterproscan
GO:0005615
all species →		Cellular Componentextracellular spaceInterproscan
GO:0031012
all species →		Cellular Componentextracellular matrixInterproscan

Search by domain instead of by gene. Any accession above (InterPro, Pfam, PANTHER, GO, KEGG) can be used as a query on the Functional Domain Search page, which searches all 148 annotated genomes at once.
 KEGG pathway
No KEGG orthology assignment for evm.model.Ap4.929.

Searching by KO or pathway ID across all species is available on the KEGG Pathway page.
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