Detailed information of evm.model.Ap5.1115 in Astrangia poculata

Genomic Location: Ap5:11723558...11729401
NR annotation: XP_020611610.1, structural maintenance of chromosomes protein 1A-like isoform X2 [Orbicella faveolata]
Species abbreviation APOCU · all data for this species · gene families


 Gene Structure
More details in JBrowse  Sequence
CDS
Transcript
Protein
 UniProt (Swiss-Prot top hit)
UniProt accessionDescription
O93308Structural maintenance of chromosomes protein 1A OS=Xenopus laevis OX=8355 GN=smc1a PE=1 SV=1
Q9CU62Structural maintenance of chromosomes protein 1A OS=Mus musculus OX=10090 GN=Smc1a PE=1 SV=4
O97593Structural maintenance of chromosomes protein 1A OS=Bos taurus OX=9913 GN=SMC1A PE=1 SV=1
 Gene family
Family typeMembership / link
Orthogroup (gene family)OG0002980 (this species only)

 Pfam domain
No Pfam domain signature was detected for evm.model.Ap5.1115. This gene does have a gene model — the search simply returned no hit.
 InterPro
InterPro termTypeDescriptionSource
IPR027417
all species →		Homologous_superfamilyP-loop containing nucleoside triphosphate hydrolaseInterproscan

 PANTHER
PANTHER termDescriptionSource
PTHR18937
all species →		STRUCTURAL MAINTENANCE OF CHROMOSOMES SMC FAMILY MEMBERInterproscan

 Gene Ontology
GO termCategoryDescriptionSource
GO:0003677
all species →		Molecular FunctionDNA bindingInterproscan
GO:0005634
all species →		Cellular ComponentnucleusInterproscan
GO:0007062
all species →		Biological Processsister chromatid cohesionInterproscan
GO:0008278
all species →		Cellular Componentcohesin complexInterproscan

Search by domain instead of by gene. Any accession above (InterPro, Pfam, PANTHER, GO, KEGG) can be used as a query on the Functional Domain Search page, which searches all 148 annotated genomes at once.
 KEGG pathway
No KEGG orthology assignment for evm.model.Ap5.1115.

Searching by KO or pathway ID across all species is available on the KEGG Pathway page.
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