Genomic Location: Ap5:14500929...14513280
NR annotation: XP_020629467.1, telomerase reverse transcriptase-like [Orbicella faveolata]
Species Astrangia poculata · all data for this species · gene families
| CDS |
| evm.model.Ap5.1336 |
| Transcript |
| evm.model.Ap5.1336 |
| Protein |
| evm.model.Ap5.1336 |
| UniProt accession | Description |
|---|---|
| Q27ID4 | Telomerase reverse transcriptase OS=Bos taurus OX=9913 GN=TERT PE=3 SV=2 |
| O14746 | Telomerase reverse transcriptase OS=Homo sapiens OX=9606 GN=TERT PE=1 SV=1 |
| Q6A548 | Telomerase reverse transcriptase OS=Canis lupus familiaris OX=9615 GN=TERT PE=2 SV=1 |
| Family type | Membership / link |
|---|---|
| Orthogroup (gene family) | OG0005425 (this species only) |
| Pfam accession | Pfam name | Description | Type | Source |
|---|---|---|---|---|
| PF00078 all species → | RVT_1 | Reverse transcriptase (RNA-dependent DNA polymerase) | Domain | Interproscan |
| PF12009 all species → | Telomerase_RBD | Telomerase ribonucleoprotein complex - RNA binding domain | Domain | Interproscan |
| PF21399 all species → | TERT_C | Telomerase reverse transcriptase, C-terminal extension | Domain | Interproscan |
| InterPro term | Type | Description | Source |
|---|---|---|---|
| IPR000477 all species → | Domain | Reverse transcriptase domain | Interproscan |
| IPR003545 all species → | Family | Telomerase reverse transcriptase | Interproscan |
| IPR021891 all species → | Domain | Telomerase ribonucleoprotein complex - RNA-binding domain | Interproscan |
| IPR049139 all species → | Domain | Telomerase reverse transcriptase, C-terminal extension | Interproscan |
| PANTHER term | Description | Source |
|---|---|---|
| PTHR12066 all species → | TELOMERASE REVERSE TRANSCRIPTASE | Interproscan |
| GO term | Category | Description | Source |
|---|---|---|---|
| GO:0000333 all species → | Cellular Component | telomerase catalytic core complex | Interproscan |
| GO:0003677 all species → | Molecular Function | DNA binding | Interproscan |
| GO:0003721 all species → | Molecular Function | obsolete telomerase RNA reverse transcriptase activity | Interproscan |
| GO:0007004 all species → | Biological Process | telomere maintenance via telomerase | Interproscan |
| GO:0042162 all species → | Molecular Function | telomeric DNA binding | Interproscan |
| GO:0070034 all species → | Molecular Function | telomerase RNA binding | Interproscan |
| GO:0003964 all species → | Molecular Function | RNA-directed DNA polymerase activity | Interproscan |
| KO | Enzyme | Enzyme ID | Pathway | Map ID | Source |
|---|---|---|---|---|---|
| K11126 | TERT, EST2; telomerase reverse transcriptase | EC:2.7.7.49 | DNA replication proteins | ko03032 | deepkoala |
Transcript abundance of evm.model.Ap5.1336 across 49 RNA-seq samples of Astrangia poculata. This gene has no row in the species' RNA-seq expression matrix, so every value below is shown as zero — the matrix simply does not cover this transcript. Values are TPM (transcripts per million) from the StringTie quantification; one bar is one sample, grouped and coloured by condition, sorted by expression within each group.
| Condition | Samples | TPM > 0 | Mean TPM | Max TPM | Mean, relative to max |
|---|---|---|---|---|---|
| whole organism · cold control | 14 | 0 | 0.00 | 0.00 | |
| whole organism · heat control | 12 | 0 | 0.00 | 0.00 | |
| whole organism · cold challenge | 12 | 0 | 0.00 | 0.00 | |
| whole organism · heat challenge | 11 | 0 | 0.00 | 0.00 |
Source: CnidoSite RNA-seq expression matrices (APOCU_TPM,
StringTie quantification over 49 runs), joined to SRA sample
metadata. Samples whose tissue/treatment is not recorded in the source metadata are grouped
by the descriptor carried in the expression matrix itself.
