Genomic Location: Ap5:14513453...14551724
NR annotation: XP_022806823.1, beta-mannosidase-like isoform X1 [Stylophora pistillata]
Species Astrangia poculata · all data for this species · gene families
| CDS |
| evm.model.Ap5.1337 |
| Transcript |
| evm.model.Ap5.1337 |
| Protein |
| evm.model.Ap5.1337 |
| UniProt accession | Description |
|---|---|
| O00462 | Beta-mannosidase OS=Homo sapiens OX=9606 GN=MANBA PE=1 SV=3 |
| Q95327 | Beta-mannosidase OS=Capra hircus OX=9925 GN=MANBA PE=1 SV=1 |
| Q29444 | Beta-mannosidase OS=Bos taurus OX=9913 GN=MANBA PE=1 SV=1 |
| Family type | Membership / link |
|---|---|
| Orthogroup (gene family) | OG0003914 (this species only) |
| Pfam accession | Pfam name | Description | Type | Source |
|---|---|---|---|---|
| PF17786 all species → | Mannosidase_ig | Mannosidase Ig/CBM-like domain | Domain | Interproscan |
| PF17753 all species → | Ig_mannosidase | Ig-fold domain | Domain | Interproscan |
| PF02836 all species → | Glyco_hydro_2_C | Glycosyl hydrolases family 2, TIM barrel domain | Domain | Interproscan |
| PF00703 all species → | Glyco_hydro_2 | Glycosyl hydrolases family 2 | Domain | Interproscan |
| InterPro term | Type | Description | Source |
|---|---|---|---|
| IPR008979 all species → | Homologous_superfamily | Galactose-binding-like domain superfamily | Interproscan |
| IPR041447 all species → | Domain | Mannosidase Ig/CBM-like domain | Interproscan |
| IPR013783 all species → | Homologous_superfamily | Immunoglobulin-like fold | Interproscan |
| IPR036156 all species → | Homologous_superfamily | Beta-Galactosidase/glucuronidase domain superfamily | Interproscan |
| IPR050887 all species → | Family | Beta-mannosidase glycosyl hydrolases | Interproscan |
| IPR041625 all species → | Domain | Beta-mannosidase, Ig-fold domain | Interproscan |
| IPR006103 all species → | Domain | Glycoside hydrolase family 2, catalytic domain | Interproscan |
| IPR017853 all species → | Homologous_superfamily | Glycoside hydrolase superfamily | Interproscan |
| IPR006102 all species → | Domain | Glycoside hydrolase, family 2, immunoglobulin-like beta-sandwich | Interproscan |
| PANTHER term | Description | Source |
|---|---|---|
| PTHR43730 all species → | BETA-MANNOSIDASE | Interproscan |
| GO term | Category | Description | Source |
|---|---|---|---|
| GO:0004567 all species → | Molecular Function | beta-mannosidase activity | Interproscan |
| GO:0006516 all species → | Biological Process | glycoprotein catabolic process | Interproscan |
| GO:0004553 all species → | Molecular Function | hydrolase activity, hydrolyzing O-glycosyl compounds | Interproscan |
| GO:0005975 all species → | Biological Process | carbohydrate metabolic process | Interproscan |
| KO | Enzyme | Enzyme ID | Pathway | Map ID | Source |
|---|---|---|---|---|---|
| K01192 | E3.2.1.25, MANBA, manB; beta-mannosidase | EC:3.2.1.25 | Lysosome | ko04142 | deepkoala |
Transcript abundance of evm.model.Ap5.1337 across 49 RNA-seq samples of Astrangia poculata. This gene has no row in the species' RNA-seq expression matrix, so every value below is shown as zero — the matrix simply does not cover this transcript. Values are TPM (transcripts per million) from the StringTie quantification; one bar is one sample, grouped and coloured by condition, sorted by expression within each group.
| Condition | Samples | TPM > 0 | Mean TPM | Max TPM | Mean, relative to max |
|---|---|---|---|---|---|
| whole organism · cold control | 14 | 0 | 0.00 | 0.00 | |
| whole organism · heat control | 12 | 0 | 0.00 | 0.00 | |
| whole organism · cold challenge | 12 | 0 | 0.00 | 0.00 | |
| whole organism · heat challenge | 11 | 0 | 0.00 | 0.00 |
Source: CnidoSite RNA-seq expression matrices (APOCU_TPM,
StringTie quantification over 49 runs), joined to SRA sample
metadata. Samples whose tissue/treatment is not recorded in the source metadata are grouped
by the descriptor carried in the expression matrix itself.
