Detailed information of evm.model.Ap5.1820 in Astrangia poculata

Genomic Location: Ap5:19511299...19520853
NR annotation: XP_028519133.1, uncharacterized protein LOC110252882, partial [Exaiptasia diaphana]
Species abbreviation APOCU · all data for this species · gene families


 Gene Structure
More details in JBrowse  Sequence
CDS
Transcript
Protein
 UniProt (Swiss-Prot top hit)
UniProt accessionDescription
Q59RQ0ATP-dependent DNA helicase PIF1 OS=Candida albicans (strain SC5314 / ATCC MYA-2876) OX=237561 GN=PIF1 PE=1 SV=2
 Gene family
Family typeMembership / link
Orthogroup (gene family)OG0000131 (this species only)

 Pfam domain
Pfam accessionPfam nameDescriptionTypeSource
PF05970
all species →
PIF1PIF1-like helicaseFamilyInterproscan
PF21473
all species →
Ssb-like_OBSingle-stranded DNA binding protein Ssb-like, OB foldDomainInterproscan
PF14214
all species →
Helitron_like_NHelitron helicase-like domain at N-terminusFamilyInterproscan

 InterPro
InterPro termTypeDescriptionSource
IPR012340
all species →
Homologous_superfamilyNucleic acid-binding, OB-foldInterproscan
IPR027417
all species →
Homologous_superfamilyP-loop containing nucleoside triphosphate hydrolaseInterproscan
IPR051055
all species →
FamilyPIF1 DNA helicaseInterproscan
IPR010285
all species →
FamilyDNA helicase Pif1-likeInterproscan
IPR036691
all species →
Homologous_superfamilyEndonuclease/exonuclease/phosphatase superfamilyInterproscan
IPR048970
all species →
DomainSingle-stranded DNA binding protein Ssb-like, OB foldInterproscan
IPR025476
all species →
DomainHelitron helicase-like domainInterproscan

 PANTHER
PANTHER termDescriptionSource
PTHR47642
all species →
ATP-DEPENDENT DNA HELICASEInterproscan

 Gene Ontology
GO termCategoryDescriptionSource
GO:0000723
all species →
Biological Processtelomere maintenanceInterproscan
GO:0003678
all species →
Molecular FunctionDNA helicase activityInterproscan
GO:0006281
all species →
Biological ProcessDNA repairInterproscan

Search by domain instead of by gene. Any accession above (InterPro, Pfam, PANTHER, GO, KEGG) can be used as a query on the Functional Domain Search page, which searches all 148 annotated genomes at once.
 KEGG pathway
No KEGG orthology assignment for evm.model.Ap5.1820.

Searching by KO or pathway ID across all species is available on the KEGG Pathway page.
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