Gene detail

Detailed information of evm.model.Ap5.1828 in Astrangia poculata

Genomic Location: Ap5:19559679...19560914
NR annotation: XP_020626681.1, ring canal kelch protein-like [Orbicella faveolata]
Species Astrangia poculata · all data for this species · gene families

Gene Structure

More details in JBrowse

Sequence

CDS

Transcript

Protein

UniProt (Swiss-Prot top hit)

UniProt accession	Description
Q80T74	Kelch-like protein 29 OS=Mus musculus OX=10090 GN=Klhl29 PE=2 SV=3
Q96CT2	Kelch-like protein 29 OS=Homo sapiens OX=9606 GN=KLHL29 PE=1 SV=3
Q5R7B8	Kelch-like protein 20 OS=Pongo abelii OX=9601 GN=KLHL20 PE=2 SV=3

Gene family

Family type	Membership / link
Orthogroup (gene family)	OG0001311 (this species only)

Pfam domain

Pfam accession	Pfam name	Description	Type	Source
PF07707 all species →	BACK	BTB And C-terminal Kelch	Domain	Interproscan
PF01344 all species →	Kelch_1	Kelch motif	Repeat	Interproscan
PF07646 all species →	Kelch_2	Kelch motif	Repeat	Interproscan
PF13964 all species →	Kelch_6	Kelch motif	Repeat	Interproscan

InterPro

InterPro term	Type	Description	Source
IPR015915 all species →	Homologous_superfamily	Kelch-type beta propeller	Interproscan
IPR006652 all species →	Repeat	Kelch repeat type 1	Interproscan
IPR011705 all species →	Domain	BTB/Kelch-associated	Interproscan
IPR011498 all species →	Repeat	Kelch repeat type 2	Interproscan

PANTHER

PANTHER term	Description	Source
PTHR24412 all species →	KELCH PROTEIN	Interproscan

Gene Ontology

GO term	Category	Description	Source
GO:0005515 all species →	Molecular Function	protein binding	Interproscan

Search by domain instead of by gene. Any accession above (InterPro, Pfam, PANTHER, GO, KEGG) can be used as a query on the Functional Domain Search page, which searches all 148 annotated genomes at once.

KEGG pathway

No KEGG orthology assignment for evm.model.Ap5.1828.

Searching by KO or pathway ID across all species is available on the KEGG Pathway page.