Detailed information of evm.model.Ap5.2135 in Astrangia poculata

Genomic Location: Ap5:22426448...22429431
NR annotation: XP_020628132.1, integrator complex subunit 9 homolog [Orbicella faveolata]
Species Astrangia poculata · all data for this species · gene families


 Gene Structure
More details in JBrowse  Sequence
CDS
Transcript
Protein
 UniProt (Swiss-Prot top hit)
UniProt accessionDescription
A7SBF0Integrator complex subunit 9 homolog OS=Nematostella vectensis OX=45351 GN=ints9 PE=3 SV=1
Q4R5Z4Integrator complex subunit 9 OS=Macaca fascicularis OX=9541 GN=INTS9 PE=2 SV=1
Q9NV88Integrator complex subunit 9 OS=Homo sapiens OX=9606 GN=INTS9 PE=1 SV=2
 Gene family
Family typeMembership / link
Orthogroup (gene family)OG0004036 (this species only)

 Pfam domain
No Pfam domain signature was detected for evm.model.Ap5.2135. This gene does have a gene model — the search simply returned no hit.
 InterPro
InterPro termTypeDescriptionSource
IPR027074
all species →		FamilyIntegrator complex subunit 9Interproscan
IPR036866
all species →		Homologous_superfamilyRibonuclease Z/Hydroxyacylglutathione hydrolase-likeInterproscan

 PANTHER
PANTHER termDescriptionSource
PTHR46094
all species →		INTEGRATOR COMPLEX SUBUNIT 9Interproscan

 Gene Ontology
GO termCategoryDescriptionSource
GO:0016180
all species →		Biological ProcesssnRNA processingInterproscan
GO:0032039
all species →		Cellular Componentintegrator complexInterproscan
GO:0034472
all species →		Biological ProcesssnRNA 3'-end processingInterproscan

Search by domain instead of by gene. Any accession above (InterPro, Pfam, PANTHER, GO, KEGG) can be used as a query on the Functional Domain Search page, which searches all 148 annotated genomes at once.
 KEGG pathway
No KEGG orthology assignment for evm.model.Ap5.2135.

Searching by KO or pathway ID across all species is available on the KEGG Pathway page.
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