Detailed information of evm.model.Ap5.219 in Astrangia poculata

Genomic Location: Ap5:2458480...2464527
NR annotation: XP_020619800.1, uncharacterized protein LOC110057548 [Orbicella faveolata]
Species abbreviation APOCU · all data for this species · gene families


 Gene Structure
More details in JBrowse  Sequence
CDS
Transcript
Protein
 UniProt (Swiss-Prot top hit)
No Swiss-Prot hit above the reporting threshold for this gene.
 Gene family
Family typeMembership / link
Orthogroup (gene family)OG0000266 (this species only)

 Pfam domain
Pfam accessionPfam nameDescriptionTypeSource
PF13424
all species →		TPR_12Tetratricopeptide repeatRepeatInterproscan
PF13401
all species →		AAA_22AAA domainDomainInterproscan
PF13374
all species →		TPR_10Tetratricopeptide repeatRepeatInterproscan

 InterPro
InterPro termTypeDescriptionSource
IPR011990
all species →		Homologous_superfamilyTetratricopeptide-like helical domain superfamilyInterproscan
IPR027417
all species →		Homologous_superfamilyP-loop containing nucleoside triphosphate hydrolaseInterproscan
IPR019734
all species →		RepeatTetratricopeptide repeatInterproscan
IPR049945
all species →		DomainORC1/DEAH AAA+ ATPase domainInterproscan

 PANTHER
PANTHER termDescriptionSource
PTHR19959
all species →		KINESIN LIGHT CHAINInterproscan

 Gene Ontology
GO termCategoryDescriptionSource
GO:0005515
all species →		Molecular Functionprotein bindingInterproscan
GO:0016887
all species →		Molecular FunctionATP hydrolysis activityInterproscan

Search by domain instead of by gene. Any accession above (InterPro, Pfam, PANTHER, GO, KEGG) can be used as a query on the Functional Domain Search page, which searches all 148 annotated genomes at once.
 KEGG pathway
No KEGG orthology assignment for evm.model.Ap5.219.

Searching by KO or pathway ID across all species is available on the KEGG Pathway page.
TOP