Detailed information of evm.model.Ap5.2337 in Astrangia poculata

Genomic Location: Ap5:24409144...24410264
NR annotation: XP_020625778.1, inner nuclear membrane protein Man1-like [Orbicella faveolata]
Species Astrangia poculata · all data for this species · gene families


 Gene Structure
More details in JBrowse  Sequence
CDS
Transcript
Protein
 UniProt (Swiss-Prot top hit)
No Swiss-Prot hit above the reporting threshold for this gene.
 Gene family
Family typeMembership / link
Orthogroup (gene family)OG0004662 (this species only)

 Pfam domain
Pfam accessionPfam nameDescriptionTypeSource
PF03020
all species →		LEMLEM domainDomainInterproscan

 InterPro
InterPro termTypeDescriptionSource
IPR003887
all species →		DomainLEM domainInterproscan
IPR052277
all species →		FamilyInner Nuclear Membrane ESCRT-Associated ProteinInterproscan
IPR011015
all species →		Homologous_superfamilyLEM/LEM-like domain superfamilyInterproscan

 PANTHER
PANTHER termDescriptionSource
PTHR13428
all species →		INNER NUCLEAR MEMBRANE PROTEIN MAN1 LEM DOMAIN CONTAINING PROTEINInterproscan

 Gene Ontology
GO termCategoryDescriptionSource
GO:0006998
all species →		Biological Processnuclear envelope organizationInterproscan
GO:0030514
all species →		Biological Processnegative regulation of BMP signaling pathwayInterproscan
GO:0031490
all species →		Molecular Functionchromatin DNA bindingInterproscan

Search by domain instead of by gene. Any accession above (InterPro, Pfam, PANTHER, GO, KEGG) can be used as a query on the Functional Domain Search page, which searches all 148 annotated genomes at once.
 KEGG pathway
No KEGG orthology assignment for evm.model.Ap5.2337.

Searching by KO or pathway ID across all species is available on the KEGG Pathway page.
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