Gene detail

Detailed information of evm.model.Ap5.2394 in Astrangia poculata

Genomic Location: Ap5:24947018...24957885
NR annotation: XP_020604654.1, protocadherin Fat 4-like [Orbicella faveolata]
Species Astrangia poculata · all data for this species · gene families

Gene Structure

More details in JBrowse

Sequence

CDS

evm.model.Ap5.2394

atgaatgattcagaacggacgtgtattccgtggaatgtatgccgatttagaactcaactctggctatggtacgttgtgttattatggacaacatgcgtgtttgatcttaacccatgtttcaccaacgcatcaacagtagccactttctatatttctgaaggactcccaaaaggatcttttgtcggcagcttgtcacatatcaactacgacatcttttcaggcatcactccacgatcagcacaaggggacttgaacgtccattcagttacgaagattattactacaaacgttgttttagatcgcgaaaccgttccaagctacgtaatttctttactggacatcaatctagcgaaaacttactcagttctagtgaatgtaaccgatgccaacgataacattccgaaattctcgagagatgtttaccatttgaaattgtacgaggaaggctccgtgcagcagcgaatcaaggcgacggacaacgatttcggctcaaactcaacgcagaaatatactatactttctggaaacgttggcagtgttttcaaactgaccgagtttttggataataatggcggtttgtgcgcggatcttggtttagttcaaggaaaggttcttgatcgagaaaagcgtgactcttacttattgaatgtgtctgccagcgatggcggcgctccgccgaaaactggtttcacgttactcaacattaccgtactagatataaacgatcatagtccagtttttacaaacaaatcttactcagccagcattgatgaaaattcaagaattggaacatcgattctgaaagttttggccactgataatgatattggcatgaacggtgaggttttgtattcgatcgagcgtggctcgcactctgatccagacagaatctttagcattcatgaaaagaccggtgttattgtcaacaatgcccttttggattacgaaaagaaacatgtttacaacatttttgttcgtgcaaagaaccctggtgttctgggatcatcaaaatatgacgaagcttctgtagcaattcatgtggtggatattaacgacaataaacccgatattcgagttgaattcgagcttggcggaagctatcaagtttccgaggacgctggtattggaacttcagtcgcacggatttatgtttctgacaaagattctggcaaaaatggcgaggttgatgttaccttacaaggaggaaatggtcattttagtgctaaatcagatcctaacaataatgtagacattattgcaactgccaaagaattagatagagaaaggcaagcgacttataccttgaaagttgttgctaaagacaggggtcaaccccagcagacttcacaggaaagtttcatcataaatgtcggagatatcaacgacaatccgcctgactttgatcaagatgtgtttactgctgtggtatcggaaaatgctaccattggttcaagtgttgtggttactcgtgccgctgacaaagacactggcttaaatgccaagttagcttacggtatttcctatataccacaagctttcaaaacatggtttcaaatcaaccagactactggagaaatccgtaccgctgcaatgctagatcgcgagaaagttccccgggccaagttcttcgtcactgttactgatttaggtgttccaccgttaagtgccaactgtacagttattgtaaacataactgatgctaacgataattacccagtctttagcagggacatttactttgcaacagttgacgagaataccgctaatggtactactgtcacgcaagtgtatgcaaatgacagtgacagtggtctgaatggaattgtgcgctattccttggagaccaagaatattccttttgttattgatcctataactggacttgtaacaacatcaggacagatcgactatgaacgtcaatcgttatacatgttgaatgttgttgctactgatggaggtgggcgagctacaatatctgttctgaacatttccgttgtcgatgagaatgataactaccctgtcataagtccaacattgtacagtgtgtcattgtacgaaaatctgacagtcggggacgtcgtagcaactattctggccaaagataatgatagtggcatattctcgcaactgaccttttctatttcaaatgggaacagtgatggccacttcttaatcgaatcattaactggaataataactttgaacaaatcccttgatcgggaaacaaaggactttcacagatttgaagtgcaggttaccgatggtggtggaaaaaagtctaaaaatttagcagtcgtacaggtgacagttctggatgtgaatgatgagcctcctgtttttgaaccaagcttttacaatttcaccatagttgaaaactctgatatatacactgtgcttggatcagtttatgcctcaagtaaagatctgggaactaatgctgatatttactattcaatcagtggtggtgatgtccacaatgtgtttaagatcaactctactggaacaatatttacacggagtaacattgaccatgagaaaactcctcggttgtggcttaacattcaagcagaagatggtggcagccctccactgtatggctttgctaatgtaagcgtgacagtaatagacctcaatgacaatcctccatcatttaaaagtagtattattgatgttaacattctagaagacaccagtgttggacaagtgttttataatgtgactgcgcaagacccagacagtggtttgtttggacaagtgagctacactcttctctccaaccctaataacacctttgaactggctcgggatacaggctcgttgtcgctgacacgcagtattgactttgaaggccctaagcagtattcaattcgagttttggcagaagatggcggatctccgccattgaatgccactgctacttatcgattaactgtcgttgacgtaaatgaccacccacccatattccccaactcgtcatactctgctcatgtgggcgagcgcacaccagcagggacaaacatcttgaatgtgacagcatctgatgcggacacaggagacaatgccagaatttcgtacacctttcaatcaggtgtggacactgccctgtttggcttgcgatcaaatggttggatttacataaagcaggaactagaccgagagatccaggaagtttatcgattcaccgtggttgcaactgacaaaggaactcccccaaagagttccacagctgttgtaactgtctatgttgatgatattaacgacaacaatccaaagttcactttgcaatcatacatattcccggtcaatgagaatgaaccgaacaggacatttgttggtcaagtttctgcttcagacaaagatgccggaagtaatgccaagattgcatacagctttgaccctcccagccctgtgtttgtgattgatcgagacacaggcattataagaactaacaaagtcctgaatcgagaacacaagaactcttactccttgatggtcaaagcgagtgaccatgggcgggaccccagggtggcccatgctagtgtcaccgtcactgttcaggatcttaatgacaatgctcccacctttaagaaactgtcctatgagaaggctgtatctgaagacattggtgttgggtcttcgatcatcactgtccaggcaactgatccagatgccgggtctaatggcatggtcacctacttcgctgccaccacaacaagtctctttagcattaatgcccagactggagtgatcacgaccgcagctcgcttggaccgtgagaagaatgagcgtcacacattaagtattggtgctaaggaccaagggaacccccctcagtccgatgttgtgtttgtcaccattcacgtcctagatgtaaatgacaaccctcctcgttttgtcaacaacagcttctttgtaaatgtgccagaaaagcagccagtcggatctgtcgtgaccaccgtgacagccaaggacattgatgccggaaacaatggtagagtgcgttacaccatcgatcaaggtaacggaggaaaagtgtttgaaataaacgccacttccggtgttataaccctacgcaaatcactggactttgaaagaagaagcaaatatcagttgaggattgtagctagagaccaaggacaaaacagccagagtagctttctgtatgtcacggtgtatgtgctagactctaacgacaacagacctaccttcgataggaaccctgtcacggtacaactgcgcgaaggcgtgccaattaactacaacgtgacaacaataaaagcgcatgactatgactctggccagaacagctggattcgatattcagtcgattctcagtcgccgggacctccgaagtttaaagtggacccgtcgacgggcaccgttcagaccatcgaagaaatcgatcgcgagtcggtcgacgaatacacgttgaacatccgagccaccgatcaagcgttcacggaatccgagcgtttatcgagcaccataacagttttcatcatcgtggacgatgtcaatgacaataagccagcgtttgtgtcgccgaactacacgtttgtaatggaggatgaaccatttggttaccctatcatcaccatcaccgccattgatcaggacttgggccgcaacggtcgagtgaagtacagaatcgtgcaaggtggcagtaaagatagcttcgggaagttctctcttgaggcggacactggtctgctaaggttgcagagcttttcgttggattacgagaccacacccaagtatgttttgaacatttctgccacagatgaagggtccccgcctcagtcctcttaccagctgcttactatttacgtgttcgatgtgaacgacaacgcgcctcaatttcgcccgagtcttttctttggcaacgtgagcgaaaacgagcccgtgggtacccttgtgatgaagataagcgccagtgataacgacagcgggtcaaacggagctctgacttacagcatccctagaggaaaggtgattcccaaatttgccatcaatgaaagcagtggtgcgatctacacaaattcgacgcttgatcgcgaggaaaaagacaagtaccaacttacagtgtatgccacggacaacgcctttccctttcgcgtgggcacatgcgcggtgacgattagagttctggacaagaatgatcacgcgccaattttcaagcctgctcgcttgaatttgactgtctttgaaggccaaactcctcacgtgttttacactttaacagctcaagatccggacatcggtgaaaatggccgcgtgcgctacgttctgaagagcggcaacgaagacaacaggttttcaatcggagagttctcgggcgcgctctcgaccacgacccggctcaacagagaagaaaaagctcgctatgatttagaaatagaagcaagcgacgtcacatcgccgttttataacaccactgcctacgtgactgtatttgttggcgacgtaaatgataattcgccgaagttcacggaagatcgtttcgaagtagacatccgggaactcacgaaaattgactctgtaattctcaccgtaacagcaactgacgacgactcggggacgaacggagatgtcgtgtattccttgagcaatgacacgtttggcgtcttccgtatcgattctaaaacaggagcgatctacactttgcagggattcaactacccggttcacaaagttttcaccttcctgtgtcacgcaaccgatagaggcgtgtccccaagacaggcatctgttgcagtgaaggtgtcaatcatcgacgagaacaaccacgcccctgagtttgagaagataccttactatgaacagatccagccctcttctgtgacagcaggagcattgttagtaacagttagcgccacggatgaggattctccatcaataactcaaatgacataccggtttgttaacggaacttcgccgcagtacttccacttggaaagtaacacaggacaattacgagtcaaacaaagcgttaataacataccagacggagcttacattttacacattcttgctgatgatggcggtaacctcaccggaagaggaatcgtggagattgtcgttggttccgtcacggtcagtccgccacagttcgtgaacagcacaccagtgttcgttacccttcccgagaatagcccgaagaatcacgaagtgacccgagtgctagcaagtgcttccagcgatatagtttacagcatagtggatggcaacagtggtaacgctttctatatcaatcctcaaagcggtgtcgtgacagtgttgaaccaagcgcagctcgattatgagagattgcgttacttccgcatccatattattgcgtcacttcgaagcggcaggtcacgaaatgattacttgacgctgtacgtgaacttgactgatgtgaatgacaacaagccagtgttttatcccgcgaatatttccgtacaactcacagaagacaatgcgttgctgtccagcggtttttcaccaagaactgtcgccacactaacaacaacagacaaagattctggagataacaacaaaatcaattacgagatcattgctggaaacgcgaagaaaaagttctccattaatcaacagtctggtgtaattaccacacagggcctcattgatcgtgaaaatcagacattttacgatctggttgtcaaggcaactgatggtggaagcccgccgaaatccagtttaagtcacgtgtttgtcaatattattgacgtcaatgacaacatcccagcattctccgggccctattccgtggaagtcgatgaagacctgaaggttggctctgtcgtgaagcgtgtcactgccactgacaatgacaaaaatccaaatctggtgtattccttcagtaatggccaaaataaccaagacgtgtttcttgttgagcggttgactggtgacgttacccttgtggtatctcttgactacgagcagataaaatcgtatgtgctaaacataacttgcagcgacggaaaatatcagtcagaaacaacgctatccgtgaatgttaaagatgtcaacgataatgctcctaaattcttggagagctcataccaggcgactctgtccgaagcaacggatgctgggacttcaatcctacgagtcagcgctgaagacgcggacagtggcactaacgggcaactcacttacaagttcgtcacttccgtcaacgaattcaggataaacgccacttccggtgtgatctacacggcgaaaaagatcgaaactggagtgcgagaatcgcttctcttcgtagtcgtgtcggctacagaccatggcatccccactcagcacgcttttgtcacggtgcagatcagaatcaaccggaaaccacagttcagcaagcctgcgtacgcggcgagcattcccgaaaacacaaaacctggtacgtcggtgctgacggtttcggccgttgatgactccggcatgaacgtggccaagattagctacgagctgaaatttggcgatccccaatcgctcttccgaatcgggcggcgcagtggtgtcattgaagtgaataagcgtggcttggactatgaaacggaaagtaattatttactcggggttgaagcgcgcgatgacagtacgaacaagagtgttgtggttgaagtgaacattaccatcaccgatgtcaacgataatccaccggttttcgatcccacgatttacatcgaagaagtcaacgaagatgtaccgatcgggacgacgcttctccgagtgaatgcttcggataaagactcgggagcgaacggacgcgtcgtgttctcaattcttactgggaacgataaacagtcttttgcgatcggcagtacgagtggtgaaatatggacagtcaagaagttggaccacgagagcatcaaggaacataaactgtcagttcaagctagagatgaaggtctcaaaccaaagactagtcttgcatctgtgagaatcaaagtaggcgacgtgaatgacaacatacctgaattccacatccctcatcccgaagacgtggcagttgaagaaaactctcccgtaggaacgtctttctacgaggttaccgccatagaccgtgactctgggaacaatggagcggtcaagtacagcatcaccggggggagtggctggggactctttgtcatcaatagtttcagcggaatgctcagtaccaatgctacatttgactacgaagctcgctcgagttacttgctggaaatcaaagctagagatgcgggaagcccgcgtttggaaaacaagataaatctgacggtttacatcaagagcgtagacgaaagtcagcccaagtttgagaaggatagctacaagtttgacatccctggtaacgcgaagatcggtgacgttgtcggccaggtcgttgctacggacgaagatggtggcgaagatggagtcgtgcgttactcatttgagttcagcagttcagatgtgtttgctatcaatcgaacttctgggatcatcttcgtgaacaagtcgatcgaggaagtcaacagcgccgcgcgcagacgaagaagtattgagttaaccgaagaagaatcgattaggtcacggagagttagaagagaggtaacaactgttacgctacgtatacgagccgatagcggtaaagcaaagtcgaacgttgggctggcctgggtagaagtaggaatagattttgcctgcgctgaatgttcgaccaccgaaagtagaaatgacagcggtgatggaggaatatccggaagtactttgtctataataattggcttggcagtcctggccggggtgattttaatcgcttttattatcgttatggccgccatttatgtgcgaaagaaaaagaaaaggaatcgacaacatccacgcttgcgttacgatggctcgtttgatgagatcactgttcacccgcatgctccgaatggaaatatcaaccatgtggattcatctcttgaaaacgtctccactccacgcggctattctcaggagtgctcccccctgaatggtccgagtgactcgcctgcccgtggaaccgagtcttcggatacgccgaacagcgcgtcgagtggccgaggatcttccgaaggcgtcgattttgacgatgcacatgcgccggttatcgtgaatggcgacatcggaagtctgcattcggagaattacgttaaaactgtggtgggacccgactcgggaattcaacaggattctgatcaagtctctcagcttactatcagcgacgggagtagcatgatgcaaggagaaggcctcgcgatcgataaacatacggacaaaatcgataagctactcgcgcggctcggaagtcaagaaagtcttcacgtgttcggcgaagaaggaggcggagaagccgatggcggagtggacgtcagcaatttattatacgcgaagctttccgaagttgacgccgacgaagatgaatcgattattgacggcatgagaccgtatgtcgaagaaggacacgaccatccttcgtacggcggctcgttgagttcgatcgtgggcagtcgcgaggaactaaccggaagttataactgggattatttgctggactggggaccgcagttccagccgctagcggacgtgtttctcgaaattgggaaaatgaaagacgacgcacctccgaagaaaaatttgagcctgagcttgccttcgagtcgggactccaggaacccgccagcgggaatggtgacaacagacatgctctcctcagtttcgtcacttcctcgctcacccataagtcctccgtcaactcgctacacttccccggcattctcaccgaactttactccggccattacgccgttagtgactcgttctccgtcggtttctcccttagacacgggggcatcatccccggtattttcgccccctacgggggcaacgcccaaatcgggctcgcggccgtcttcaatgcatgtgatgcagctacggagggactcccatgacggctcgaactcagatttgactcattcgccgtcaatatcagacaatgaatccaatttagaaatcgatgtatag

Transcript

evm.model.Ap5.2394

ATGAATGATTCAGAACGGACGTGTATTCCGTGGAATGTATGCCGATTTAGAACTCAACTCTGGCTATGGTACGTTGTGTTATTATGGACAACATGCGTGTTTGATCTTAACCCATGTTTCACCAACGCATCAACAGTAGCCACTTTCTATATTTCTGAAGGACTCCCAAAAGGATCTTTTGTCGGCAGCTTGTCACATATCAACTACGACATCTTTTCAGGCATCACTCCACGATCAGCACAAGGGGACTTGAACGTCCATTCAGTTACGAAGATTATTACTACAAACGTTGTTTTAGATCGCGAAACCGTTCCAAGCTACGTAATTTCTTTACTGGACATCAATCTAGCGAAAACTTACTCAGTTCTAGTGAATGTAACCGATGCCAACGATAACATTCCGAAATTCTCGAGAGATGTTTACCATTTGAAATTGTACGAGGAAGGCTCCGTGCAGCAGCGAATCAAGGCGACGGACAACGATTTCGGCTCAAACTCAACGCAGAAATATACTATACTTTCTGGAAACGTTGGCAGTGTTTTCAAACTGACCGAGTTTTTGGATAATAATGGCGGTTTGTGCGCGGATCTTGGTTTAGTTCAAGGAAAGGTTCTTGATCGAGAAAAGCGTGACTCTTACTTATTGAATGTGTCTGCCAGCGATGGCGGCGCTCCGCCGAAAACTGGTTTCACGTTACTCAACATTACCGTACTAGATATAAACGATCATAGTCCAGTTTTTACAAACAAATCTTACTCAGCCAGCATTGATGAAAATTCAAGAATTGGAACATCGATTCTGAAAGTTTTGGCCACTGATAATGATATTGGCATGAACGGTGAGGTTTTGTATTCGATCGAGCGTGGCTCGCACTCTGATCCAGACAGAATCTTTAGCATTCATGAAAAGACCGGTGTTATTGTCAACAATGCCCTTTTGGATTACGAAAAGAAACATGTTTACAACATTTTTGTTCGTGCAAAGAACCCTGGTGTTCTGGGATCATCAAAATATGACGAAGCTTCTGTAGCAATTCATGTGGTGGATATTAACGACAATAAACCCGATATTCGAGTTGAATTCGAGCTTGGCGGAAGCTATCAAGTTTCCGAGGACGCTGGTATTGGAACTTCAGTCGCACGGATTTATGTTTCTGACAAAGATTCTGGCAAAAATGGCGAGGTTGATGTTACCTTACAAGGAGGAAATGGTCATTTTAGTGCTAAATCAGATCCTAACAATAATGTAGACATTATTGCAACTGCCAAAGAATTAGATAGAGAAAGGCAAGCGACTTATACCTTGAAAGTTGTTGCTAAAGACAGGGGTCAACCCCAGCAGACTTCACAGGAAAGTTTCATCATAAATGTCGGAGATATCAACGACAATCCGCCTGACTTTGATCAAGATGTGTTTACTGCTGTGGTATCGGAAAATGCTACCATTGGTTCAAGTGTTGTGGTTACTCGTGCCGCTGACAAAGACACTGGCTTAAATGCCAAGTTAGCTTACGGTATTTCCTATATACCACAAGCTTTCAAAACATGGTTTCAAATCAACCAGACTACTGGAGAAATCCGTACCGCTGCAATGCTAGATCGCGAGAAAGTTCCCCGGGCCAAGTTCTTCGTCACTGTTACTGATTTAGGTGTTCCACCGTTAAGTGCCAACTGTACAGTTATTGTAAACATAACTGATGCTAACGATAATTACCCAGTCTTTAGCAGGGACATTTACTTTGCAACAGTTGACGAGAATACCGCTAATGGTACTACTGTCACGCAAGTGTATGCAAATGACAGTGACAGTGGTCTGAATGGAATTGTGCGCTATTCCTTGGAGACCAAGAATATTCCTTTTGTTATTGATCCTATAACTGGACTTGTAACAACATCAGGACAGATCGACTATGAACGTCAATCGTTATACATGTTGAATGTTGTTGCTACTGATGGAGGTGGGCGAGCTACAATATCTGTTCTGAACATTTCCGTTGTCGATGAGAATGATAACTACCCTGTCATAAGTCCAACATTGTACAGTGTGTCATTGTACGAAAATCTGACAGTCGGGGACGTCGTAGCAACTATTCTGGCCAAAGATAATGATAGTGGCATATTCTCGCAACTGACCTTTTCTATTTCAAATGGGAACAGTGATGGCCACTTCTTAATCGAATCATTAACTGGAATAATAACTTTGAACAAATCCCTTGATCGGGAAACAAAGGACTTTCACAGATTTGAAGTGCAGGTTACCGATGGTGGTGGAAAAAAGTCTAAAAATTTAGCAGTCGTACAGGTGACAGTTCTGGATGTGAATGATGAGCCTCCTGTTTTTGAACCAAGCTTTTACAATTTCACCATAGTTGAAAACTCTGATATATACACTGTGCTTGGATCAGTTTATGCCTCAAGTAAAGATCTGGGAACTAATGCTGATATTTACTATTCAATCAGTGGTGGTGATGTCCACAATGTGTTTAAGATCAACTCTACTGGAACAATATTTACACGGAGTAACATTGACCATGAGAAAACTCCTCGGTTGTGGCTTAACATTCAAGCAGAAGATGGTGGCAGCCCTCCACTGTATGGCTTTGCTAATGTAAGCGTGACAGTAATAGACCTCAATGACAATCCTCCATCATTTAAAAGTAGTATTATTGATGTTAACATTCTAGAAGACACCAGTGTTGGACAAGTGTTTTATAATGTGACTGCGCAAGACCCAGACAGTGGTTTGTTTGGACAAGTGAGCTACACTCTTCTCTCCAACCCTAATAACACCTTTGAACTGGCTCGGGATACAGGCTCGTTGTCGCTGACACGCAGTATTGACTTTGAAGGCCCTAAGCAGTATTCAATTCGAGTTTTGGCAGAAGATGGCGGATCTCCGCCATTGAATGCCACTGCTACTTATCGATTAACTGTCGTTGACGTAAATGACCACCCACCCATATTCCCCAACTCGTCATACTCTGCTCATGTGGGCGAGCGCACACCAGCAGGGACAAACATCTTGAATGTGACAGCATCTGATGCGGACACAGGAGACAATGCCAGAATTTCGTACACCTTTCAATCAGGTGTGGACACTGCCCTGTTTGGCTTGCGATCAAATGGTTGGATTTACATAAAGCAGGAACTAGACCGAGAGATCCAGGAAGTTTATCGATTCACCGTGGTTGCAACTGACAAAGGAACTCCCCCAAAGAGTTCCACAGCTGTTGTAACTGTCTATGTTGATGATATTAACGACAACAATCCAAAGTTCACTTTGCAATCATACATATTCCCGGTCAATGAGAATGAACCGAACAGGACATTTGTTGGTCAAGTTTCTGCTTCAGACAAAGATGCCGGAAGTAATGCCAAGATTGCATACAGCTTTGACCCTCCCAGCCCTGTGTTTGTGATTGATCGAGACACAGGCATTATAAGAACTAACAAAGTCCTGAATCGAGAACACAAGAACTCTTACTCCTTGATGGTCAAAGCGAGTGACCATGGGCGGGACCCCAGGGTGGCCCATGCTAGTGTCACCGTCACTGTTCAGGATCTTAATGACAATGCTCCCACCTTTAAGAAACTGTCCTATGAGAAGGCTGTATCTGAAGACATTGGTGTTGGGTCTTCGATCATCACTGTCCAGGCAACTGATCCAGATGCCGGGTCTAATGGCATGGTCACCTACTTCGCTGCCACCACAACAAGTCTCTTTAGCATTAATGCCCAGACTGGAGTGATCACGACCGCAGCTCGCTTGGACCGTGAGAAGAATGAGCGTCACACATTAAGTATTGGTGCTAAGGACCAAGGGAACCCCCCTCAGTCCGATGTTGTGTTTGTCACCATTCACGTCCTAGATGTAAATGACAACCCTCCTCGTTTTGTCAACAACAGCTTCTTTGTAAATGTGCCAGAAAAGCAGCCAGTCGGATCTGTCGTGACCACCGTGACAGCCAAGGACATTGATGCCGGAAACAATGGTAGAGTGCGTTACACCATCGATCAAGGTAACGGAGGAAAAGTGTTTGAAATAAACGCCACTTCCGGTGTTATAACCCTACGCAAATCACTGGACTTTGAAAGAAGAAGCAAATATCAGTTGAGGATTGTAGCTAGAGACCAAGGACAAAACAGCCAGAGTAGCTTTCTGTATGTCACGGTGTATGTGCTAGACTCTAACGACAACAGACCTACCTTCGATAGGAACCCTGTCACGGTACAACTGCGCGAAGGCGTGCCAATTAACTACAACGTGACAACAATAAAAGCGCATGACTATGACTCTGGCCAGAACAGCTGGATTCGATATTCAGTCGATTCTCAGTCGCCGGGACCTCCGAAGTTTAAAGTGGACCCGTCGACGGGCACCGTTCAGACCATCGAAGAAATCGATCGCGAGTCGGTCGACGAATACACGTTGAACATCCGAGCCACCGATCAAGCGTTCACGGAATCCGAGCGTTTATCGAGCACCATAACAGTTTTCATCATCGTGGACGATGTCAATGACAATAAGCCAGCGTTTGTGTCGCCGAACTACACGTTTGTAATGGAGGATGAACCATTTGGTTACCCTATCATCACCATCACCGCCATTGATCAGGACTTGGGCCGCAACGGTCGAGTGAAGTACAGAATCGTGCAAGGTGGCAGTAAAGATAGCTTCGGGAAGTTCTCTCTTGAGGCGGACACTGGTCTGCTAAGGTTGCAGAGCTTTTCGTTGGATTACGAGACCACACCCAAGTATGTTTTGAACATTTCTGCCACAGATGAAGGGTCCCCGCCTCAGTCCTCTTACCAGCTGCTTACTATTTACGTGTTCGATGTGAACGACAACGCGCCTCAATTTCGCCCGAGTCTTTTCTTTGGCAACGTGAGCGAAAACGAGCCCGTGGGTACCCTTGTGATGAAGATAAGCGCCAGTGATAACGACAGCGGGTCAAACGGAGCTCTGACTTACAGCATCCCTAGAGGAAAGGTGATTCCCAAATTTGCCATCAATGAAAGCAGTGGTGCGATCTACACAAATTCGACGCTTGATCGCGAGGAAAAAGACAAGTACCAACTTACAGTGTATGCCACGGACAACGCCTTTCCCTTTCGCGTGGGCACATGCGCGGTGACGATTAGAGTTCTGGACAAGAATGATCACGCGCCAATTTTCAAGCCTGCTCGCTTGAATTTGACTGTCTTTGAAGGCCAAACTCCTCACGTGTTTTACACTTTAACAGCTCAAGATCCGGACATCGGTGAAAATGGCCGCGTGCGCTACGTTCTGAAGAGCGGCAACGAAGACAACAGGTTTTCAATCGGAGAGTTCTCGGGCGCGCTCTCGACCACGACCCGGCTCAACAGAGAAGAAAAAGCTCGCTATGATTTAGAAATAGAAGCAAGCGACGTCACATCGCCGTTTTATAACACCACTGCCTACGTGACTGTATTTGTTGGCGACGTAAATGATAATTCGCCGAAGTTCACGGAAGATCGTTTCGAAGTAGACATCCGGGAACTCACGAAAATTGACTCTGTAATTCTCACCGTAACAGCAACTGACGACGACTCGGGGACGAACGGAGATGTCGTGTATTCCTTGAGCAATGACACGTTTGGCGTCTTCCGTATCGATTCTAAAACAGGAGCGATCTACACTTTGCAGGGATTCAACTACCCGGTTCACAAAGTTTTCACCTTCCTGTGTCACGCAACCGATAGAGGCGTGTCCCCAAGACAGGCATCTGTTGCAGTGAAGGTGTCAATCATCGACGAGAACAACCACGCCCCTGAGTTTGAGAAGATACCTTACTATGAACAGATCCAGCCCTCTTCTGTGACAGCAGGAGCATTGTTAGTAACAGTTAGCGCCACGGATGAGGATTCTCCATCAATAACTCAAATGACATACCGGTTTGTTAACGGAACTTCGCCGCAGTACTTCCACTTGGAAAGTAACACAGGACAATTACGAGTCAAACAAAGCGTTAATAACATACCAGACGGAGCTTACATTTTACACATTCTTGCTGATGATGGCGGTAACCTCACCGGAAGAGGAATCGTGGAGATTGTCGTTGGTTCCGTCACGGTCAGTCCGCCACAGTTCGTGAACAGCACACCAGTGTTCGTTACCCTTCCCGAGAATAGCCCGAAGAATCACGAAGTGACCCGAGTGCTAGCAAGTGCTTCCAGCGATATAGTTTACAGCATAGTGGATGGCAACAGTGGTAACGCTTTCTATATCAATCCTCAAAGCGGTGTCGTGACAGTGTTGAACCAAGCGCAGCTCGATTATGAGAGATTGCGTTACTTCCGCATCCATATTATTGCGTCACTTCGAAGCGGCAGGTCACGAAATGATTACTTGACGCTGTACGTGAACTTGACTGATGTGAATGACAACAAGCCAGTGTTTTATCCCGCGAATATTTCCGTACAACTCACAGAAGACAATGCGTTGCTGTCCAGCGGTTTTTCACCAAGAACTGTCGCCACACTAACAACAACAGACAAAGATTCTGGAGATAACAACAAAATCAATTACGAGATCATTGCTGGAAACGCGAAGAAAAAGTTCTCCATTAATCAACAGTCTGGTGTAATTACCACACAGGGCCTCATTGATCGTGAAAATCAGACATTTTACGATCTGGTTGTCAAGGCAACTGATGGTGGAAGCCCGCCGAAATCCAGTTTAAGTCACGTGTTTGTCAATATTATTGACGTCAATGACAACATCCCAGCATTCTCCGGGCCCTATTCCGTGGAAGTCGATGAAGACCTGAAGGTTGGCTCTGTCGTGAAGCGTGTCACTGCCACTGACAATGACAAAAATCCAAATCTGGTGTATTCCTTCAGTAATGGCCAAAATAACCAAGACGTGTTTCTTGTTGAGCGGTTGACTGGTGACGTTACCCTTGTGGTATCTCTTGACTACGAGCAGATAAAATCGTATGTGCTAAACATAACTTGCAGCGACGGAAAATATCAGTCAGAAACAACGCTATCCGTGAATGTTAAAGATGTCAACGATAATGCTCCTAAATTCTTGGAGAGCTCATACCAGGCGACTCTGTCCGAAGCAACGGATGCTGGGACTTCAATCCTACGAGTCAGCGCTGAAGACGCGGACAGTGGCACTAACGGGCAACTCACTTACAAGTTCGTCACTTCCGTCAACGAATTCAGGATAAACGCCACTTCCGGTGTGATCTACACGGCGAAAAAGATCGAAACTGGAGTGCGAGAATCGCTTCTCTTCGTAGTCGTGTCGGCTACAGACCATGGCATCCCCACTCAGCACGCTTTTGTCACGGTGCAGATCAGAATCAACCGGAAACCACAGTTCAGCAAGCCTGCGTACGCGGCGAGCATTCCCGAAAACACAAAACCTGGTACGTCGGTGCTGACGGTTTCGGCCGTTGATGACTCCGGCATGAACGTGGCCAAGATTAGCTACGAGCTGAAATTTGGCGATCCCCAATCGCTCTTCCGAATCGGGCGGCGCAGTGGTGTCATTGAAGTGAATAAGCGTGGCTTGGACTATGAAACGGAAAGTAATTATTTACTCGGGGTTGAAGCGCGCGATGACAGTACGAACAAGAGTGTTGTGGTTGAAGTGAACATTACCATCACCGATGTCAACGATAATCCACCGGTTTTCGATCCCACGATTTACATCGAAGAAGTCAACGAAGATGTACCGATCGGGACGACGCTTCTCCGAGTGAATGCTTCGGATAAAGACTCGGGAGCGAACGGACGCGTCGTGTTCTCAATTCTTACTGGGAACGATAAACAGTCTTTTGCGATCGGCAGTACGAGTGGTGAAATATGGACAGTCAAGAAGTTGGACCACGAGAGCATCAAGGAACATAAACTGTCAGTTCAAGCTAGAGATGAAGGTCTCAAACCAAAGACTAGTCTTGCATCTGTGAGAATCAAAGTAGGCGACGTGAATGACAACATACCTGAATTCCACATCCCTCATCCCGAAGACGTGGCAGTTGAAGAAAACTCTCCCGTAGGAACGTCTTTCTACGAGGTTACCGCCATAGACCGTGACTCTGGGAACAATGGAGCGGTCAAGTACAGCATCACCGGGGGGAGTGGCTGGGGACTCTTTGTCATCAATAGTTTCAGCGGAATGCTCAGTACCAATGCTACATTTGACTACGAAGCTCGCTCGAGTTACTTGCTGGAAATCAAAGCTAGAGATGCGGGAAGCCCGCGTTTGGAAAACAAGATAAATCTGACGGTTTACATCAAGAGCGTAGACGAAAGTCAGCCCAAGTTTGAGAAGGATAGCTACAAGTTTGACATCCCTGGTAACGCGAAGATCGGTGACGTTGTCGGCCAGGTCGTTGCTACGGACGAAGATGGTGGCGAAGATGGAGTCGTGCGTTACTCATTTGAGTTCAGCAGTTCAGATGTGTTTGCTATCAATCGAACTTCTGGGATCATCTTCGTGAACAAGTCGATCGAGGAAGTCAACAGCGCCGCGCGCAGACGAAGAAGTATTGAGTTAACCGAAGAAGAATCGATTAGGTCACGGAGAGTTAGAAGAGAGGTAACAACTGTTACGCTACGTATACGAGCCGATAGCGGTAAAGCAAAGTCGAACGTTGGGCTGGCCTGGGTAGAAGTAGGAATAGATTTTGCCTGCGCTGAATGTTCGACCACCGAAAGTAGAAATGACAGCGGTGATGGAGGAATATCCGGAAGTACTTTGTCTATAATAATTGGCTTGGCAGTCCTGGCCGGGGTGATTTTAATCGCTTTTATTATCGTTATGGCCGCCATTTATGTGCGAAAGAAAAAGAAAAGGAATCGACAACATCCACGCTTGCGTTACGATGGCTCGTTTGATGAGATCACTGTTCACCCGCATGCTCCGAATGGAAATATCAACCATGTGGATTCATCTCTTGAAAACGTCTCCACTCCACGCGGCTATTCTCAGGAGTGCTCCCCCCTGAATGGTCCGAGTGACTCGCCTGCCCGTGGAACCGAGTCTTCGGATACGCCGAACAGCGCGTCGAGTGGCCGAGGATCTTCCGAAGGCGTCGATTTTGACGATGCACATGCGCCGGTTATCGTGAATGGCGACATCGGAAGTCTGCATTCGGAGAATTACGTTAAAACTGTGGTGGGACCCGACTCGGGAATTCAACAGGATTCTGATCAAGTCTCTCAGCTTACTATCAGCGACGGGAGTAGCATGATGCAAGGAGAAGGCCTCGCGATCGATAAACATACGGACAAAATCGATAAGCTACTCGCGCGGCTCGGAAGTCAAGAAAGTCTTCACGTGTTCGGCGAAGAAGGAGGCGGAGAAGCCGATGGCGGAGTGGACGTCAGCAATTTATTATACGCGAAGCTTTCCGAAGTTGACGCCGACGAAGATGAATCGATTATTGACGGCATGAGACCGTATGTCGAAGAAGGACACGACCATCCTTCGTACGGCGGCTCGTTGAGTTCGATCGTGGGCAGTCGCGAGGAACTAACCGGAAGTTATAACTGGGATTATTTGCTGGACTGGGGACCGCAGTTCCAGCCGCTAGCGGACGTGTTTCTCGAAATTGGGAAAATGAAAGACGACGCACCTCCGAAGAAAAATTTGAGCCTGAGCTTGCCTTCGAGTCGGGACTCCAGGAACCCGCCAGCGGGAATGGTGACAACAGACATGCTCTCCTCAGTTTCGTCACTTCCTCGCTCACCCATAAGTCCTCCGTCAACTCGCTACACTTCCCCGGCATTCTCACCGAACTTTACTCCGGCCATTACGCCGTTAGTGACTCGTTCTCCGTCGGTTTCTCCCTTAGACACGGGGGCATCATCCCCGGTATTTTCGCCCCCTACGGGGGCAACGCCCAAATCGGGCTCGCGGCCGTCTTCAATGCATGTGATGCAGCTACGGAGGGACTCCCATGACGGCTCGAACTCAGATTTGACTCATTCGCCGTCAATATCAGACAATGAATCCAATTTAGAAATCGATGTATAG

Protein

evm.model.Ap5.2394

MNDSERTCIPWNVCRFRTQLWLWYVVLLWTTCVFDLNPCFTNASTVATFYISEGLPKGSFVGSLSHINYDIFSGITPRSAQGDLNVHSVTKIITTNVVLDRETVPSYVISLLDINLAKTYSVLVNVTDANDNIPKFSRDVYHLKLYEEGSVQQRIKATDNDFGSNSTQKYTILSGNVGSVFKLTEFLDNNGGLCADLGLVQGKVLDREKRDSYLLNVSASDGGAPPKTGFTLLNITVLDINDHSPVFTNKSYSASIDENSRIGTSILKVLATDNDIGMNGEVLYSIERGSHSDPDRIFSIHEKTGVIVNNALLDYEKKHVYNIFVRAKNPGVLGSSKYDEASVAIHVVDINDNKPDIRVEFELGGSYQVSEDAGIGTSVARIYVSDKDSGKNGEVDVTLQGGNGHFSAKSDPNNNVDIIATAKELDRERQATYTLKVVAKDRGQPQQTSQESFIINVGDINDNPPDFDQDVFTAVVSENATIGSSVVVTRAADKDTGLNAKLAYGISYIPQAFKTWFQINQTTGEIRTAAMLDREKVPRAKFFVTVTDLGVPPLSANCTVIVNITDANDNYPVFSRDIYFATVDENTANGTTVTQVYANDSDSGLNGIVRYSLETKNIPFVIDPITGLVTTSGQIDYERQSLYMLNVVATDGGGRATISVLNISVVDENDNYPVISPTLYSVSLYENLTVGDVVATILAKDNDSGIFSQLTFSISNGNSDGHFLIESLTGIITLNKSLDRETKDFHRFEVQVTDGGGKKSKNLAVVQVTVLDVNDEPPVFEPSFYNFTIVENSDIYTVLGSVYASSKDLGTNADIYYSISGGDVHNVFKINSTGTIFTRSNIDHEKTPRLWLNIQAEDGGSPPLYGFANVSVTVIDLNDNPPSFKSSIIDVNILEDTSVGQVFYNVTAQDPDSGLFGQVSYTLLSNPNNTFELARDTGSLSLTRSIDFEGPKQYSIRVLAEDGGSPPLNATATYRLTVVDVNDHPPIFPNSSYSAHVGERTPAGTNILNVTASDADTGDNARISYTFQSGVDTALFGLRSNGWIYIKQELDREIQEVYRFTVVATDKGTPPKSSTAVVTVYVDDINDNNPKFTLQSYIFPVNENEPNRTFVGQVSASDKDAGSNAKIAYSFDPPSPVFVIDRDTGIIRTNKVLNREHKNSYSLMVKASDHGRDPRVAHASVTVTVQDLNDNAPTFKKLSYEKAVSEDIGVGSSIITVQATDPDAGSNGMVTYFAATTTSLFSINAQTGVITTAARLDREKNERHTLSIGAKDQGNPPQSDVVFVTIHVLDVNDNPPRFVNNSFFVNVPEKQPVGSVVTTVTAKDIDAGNNGRVRYTIDQGNGGKVFEINATSGVITLRKSLDFERRSKYQLRIVARDQGQNSQSSFLYVTVYVLDSNDNRPTFDRNPVTVQLREGVPINYNVTTIKAHDYDSGQNSWIRYSVDSQSPGPPKFKVDPSTGTVQTIEEIDRESVDEYTLNIRATDQAFTESERLSSTITVFIIVDDVNDNKPAFVSPNYTFVMEDEPFGYPIITITAIDQDLGRNGRVKYRIVQGGSKDSFGKFSLEADTGLLRLQSFSLDYETTPKYVLNISATDEGSPPQSSYQLLTIYVFDVNDNAPQFRPSLFFGNVSENEPVGTLVMKISASDNDSGSNGALTYSIPRGKVIPKFAINESSGAIYTNSTLDREEKDKYQLTVYATDNAFPFRVGTCAVTIRVLDKNDHAPIFKPARLNLTVFEGQTPHVFYTLTAQDPDIGENGRVRYVLKSGNEDNRFSIGEFSGALSTTTRLNREEKARYDLEIEASDVTSPFYNTTAYVTVFVGDVNDNSPKFTEDRFEVDIRELTKIDSVILTVTATDDDSGTNGDVVYSLSNDTFGVFRIDSKTGAIYTLQGFNYPVHKVFTFLCHATDRGVSPRQASVAVKVSIIDENNHAPEFEKIPYYEQIQPSSVTAGALLVTVSATDEDSPSITQMTYRFVNGTSPQYFHLESNTGQLRVKQSVNNIPDGAYILHILADDGGNLTGRGIVEIVVGSVTVSPPQFVNSTPVFVTLPENSPKNHEVTRVLASASSDIVYSIVDGNSGNAFYINPQSGVVTVLNQAQLDYERLRYFRIHIIASLRSGRSRNDYLTLYVNLTDVNDNKPVFYPANISVQLTEDNALLSSGFSPRTVATLTTTDKDSGDNNKINYEIIAGNAKKKFSINQQSGVITTQGLIDRENQTFYDLVVKATDGGSPPKSSLSHVFVNIIDVNDNIPAFSGPYSVEVDEDLKVGSVVKRVTATDNDKNPNLVYSFSNGQNNQDVFLVERLTGDVTLVVSLDYEQIKSYVLNITCSDGKYQSETTLSVNVKDVNDNAPKFLESSYQATLSEATDAGTSILRVSAEDADSGTNGQLTYKFVTSVNEFRINATSGVIYTAKKIETGVRESLLFVVVSATDHGIPTQHAFVTVQIRINRKPQFSKPAYAASIPENTKPGTSVLTVSAVDDSGMNVAKISYELKFGDPQSLFRIGRRSGVIEVNKRGLDYETESNYLLGVEARDDSTNKSVVVEVNITITDVNDNPPVFDPTIYIEEVNEDVPIGTTLLRVNASDKDSGANGRVVFSILTGNDKQSFAIGSTSGEIWTVKKLDHESIKEHKLSVQARDEGLKPKTSLASVRIKVGDVNDNIPEFHIPHPEDVAVEENSPVGTSFYEVTAIDRDSGNNGAVKYSITGGSGWGLFVINSFSGMLSTNATFDYEARSSYLLEIKARDAGSPRLENKINLTVYIKSVDESQPKFEKDSYKFDIPGNAKIGDVVGQVVATDEDGGEDGVVRYSFEFSSSDVFAINRTSGIIFVNKSIEEVNSAARRRRSIELTEEESIRSRRVRREVTTVTLRIRADSGKAKSNVGLAWVEVGIDFACAECSTTESRNDSGDGGISGSTLSIIIGLAVLAGVILIAFIIVMAAIYVRKKKKRNRQHPRLRYDGSFDEITVHPHAPNGNINHVDSSLENVSTPRGYSQECSPLNGPSDSPARGTESSDTPNSASSGRGSSEGVDFDDAHAPVIVNGDIGSLHSENYVKTVVGPDSGIQQDSDQVSQLTISDGSSMMQGEGLAIDKHTDKIDKLLARLGSQESLHVFGEEGGGEADGGVDVSNLLYAKLSEVDADEDESIIDGMRPYVEEGHDHPSYGGSLSSIVGSREELTGSYNWDYLLDWGPQFQPLADVFLEIGKMKDDAPPKKNLSLSLPSSRDSRNPPAGMVTTDMLSSVSSLPRSPISPPSTRYTSPAFSPNFTPAITPLVTRSPSVSPLDTGASSPVFSPPTGATPKSGSRPSSMHVMQLRRDSHDGSNSDLTHSPSISDNESNLEIDV*

UniProt (Swiss-Prot top hit)

UniProt accession	Description
E9PVD3	Protocadherin-16 OS=Mus musculus OX=10090 GN=Dchs1 PE=1 SV=1
D4ACX8	Protocadherin-16 OS=Rattus norvegicus OX=10116 GN=Dchs1 PE=3 SV=2
Q96JQ0	Protocadherin-16 OS=Homo sapiens OX=9606 GN=DCHS1 PE=1 SV=1

Gene family

Family type	Membership / link
Orthogroup (gene family)	OG0000235 (this species only)

Pfam domain

Pfam accession	Pfam name	Description	Type	Source
PF00028 all species →	Cadherin	Cadherin domain	Domain	Interproscan
PF01049 all species →	CADH_Y-type_LIR	Cadherin, Y-type LIR-motif	Family	Interproscan

InterPro

InterPro term	Type	Description	Source
IPR002126 all species →	Domain	Cadherin-like	Interproscan
IPR015919 all species →	Homologous_superfamily	Cadherin-like superfamily	Interproscan
IPR020894 all species →	Conserved_site	Cadherin conserved site	Interproscan
IPR039808 all species →	Family	Cadherin	Interproscan
IPR000233 all species →	Domain	Cadherin, Y-type LIR-motif	Interproscan
IPR027397 all species →	Homologous_superfamily	Catenin binding domain superfamily	Interproscan

PANTHER

PANTHER term	Description	Source
PTHR24027 all species →	CADHERIN-23	Interproscan

Gene Ontology

GO term	Category	Description	Source
GO:0005509 all species →	Molecular Function	calcium ion binding	Interproscan
GO:0007156 all species →	Biological Process	homophilic cell adhesion via plasma membrane adhesion molecules	Interproscan
GO:0016020 all species →	Cellular Component	membrane	Interproscan
GO:0005886 all species →	Cellular Component	plasma membrane	Interproscan
GO:0007155 all species →	Biological Process	cell adhesion	Interproscan
GO:0016342 all species →	Cellular Component	catenin complex	Interproscan
GO:0045296 all species →	Molecular Function	cadherin binding	Interproscan
GO:0098609 all species →	Biological Process	cell-cell adhesion	Interproscan
GO:0098742 all species →	Biological Process	cell-cell adhesion via plasma-membrane adhesion molecules	Interproscan

Search by domain instead of by gene. Any accession above (InterPro, Pfam, PANTHER, GO, KEGG) can be used as a query on the Functional Domain Search page, which searches all 148 annotated genomes at once.

KEGG pathway

KO	Enzyme	Enzyme ID	Pathway	Map ID	Source
K16507	DCHS1_2, PCDH16_23; protocadherin-16/23	-	Cell adhesion molecules	ko04515	deepkoala

Searching by KO or pathway ID across all species is available on the KEGG Pathway page.