Detailed information of evm.model.Ap5.2560 in Astrangia poculata

Genomic Location: Ap5:26321735...26322742
NR annotation: XP_044165815.1, uncharacterized protein LOC122949824 [Acropora millepora]
Species Astrangia poculata · all data for this species · gene families


 Gene Structure
More details in JBrowse  Sequence
CDS
Transcript
Protein
 UniProt (Swiss-Prot top hit)
No Swiss-Prot hit above the reporting threshold for this gene.
 Gene family
Family typeMembership / link
Orthogroup (gene family)OG0000476 (this species only)
Transcription factor familyPAX · all TF in this species

 Pfam domain
Pfam accessionPfam nameDescriptionTypeSource
PF13358
all species →		DDE_3DDE superfamily endonucleaseDomainInterproscan
PF00292
all species →		PAX'Paired box' domainDomainInterproscan

 InterPro
InterPro termTypeDescriptionSource
IPR038717
all species →		DomainTc1-like transposase, DDE domainInterproscan
IPR036397
all species →		Homologous_superfamilyRibonuclease H superfamilyInterproscan
IPR001523
all species →		DomainPaired domainInterproscan
IPR036388
all species →		Homologous_superfamilyWinged helix-like DNA-binding domain superfamilyInterproscan
IPR009057
all species →		Homologous_superfamilyHomeobox-like domain superfamilyInterproscan

 PANTHER
PANTHER termDescriptionSource
PTHR46564
all species →		TRANSPOSASEInterproscan

 Gene Ontology
GO termCategoryDescriptionSource
GO:0003676
all species →		Molecular Functionnucleic acid bindingInterproscan
GO:0003677
all species →		Molecular FunctionDNA bindingInterproscan
GO:0006355
all species →		Biological Processregulation of DNA-templated transcriptionInterproscan

Search by domain instead of by gene. Any accession above (InterPro, Pfam, PANTHER, GO, KEGG) can be used as a query on the Functional Domain Search page, which searches all 148 annotated genomes at once.
 KEGG pathway
No KEGG orthology assignment for evm.model.Ap5.2560.

Searching by KO or pathway ID across all species is available on the KEGG Pathway page.
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