Detailed information of evm.model.Ap5.2578 in Astrangia poculata

Genomic Location: Ap5:26536232...26550730
NR annotation: XP_020604126.1, arf-GAP with Rho-GAP domain, ANK repeat and PH domain-containing protein 1-like isoform X1 [Orbicella faveolata]
Species Astrangia poculata · all data for this species · gene families


 Gene Structure
More details in JBrowse  Sequence
CDS
Transcript
Protein
 UniProt (Swiss-Prot top hit)
UniProt accessionDescription
Q96P50Arf-GAP with coiled-coil, ANK repeat and PH domain-containing protein 3 OS=Homo sapiens OX=9606 GN=ACAP3 PE=1 SV=2
Q6ZQK5Arf-GAP with coiled-coil, ANK repeat and PH domain-containing protein 2 OS=Mus musculus OX=10090 GN=Acap2 PE=1 SV=2
Q5FVC7Arf-GAP with coiled-coil, ANK repeat and PH domain-containing protein 2 OS=Rattus norvegicus OX=10116 GN=Acap2 PE=1 SV=1
 Gene family
Family typeMembership / link
Orthogroup (gene family)OG0002979 (this species only)

 Pfam domain
Pfam accessionPfam nameDescriptionTypeSource
PF07647
all species →		SAM_2SAM domain (Sterile alpha motif)DomainInterproscan
PF01412
all species →		ArfGapPutative GTPase activating protein for ArfDomainInterproscan
PF00169
all species →		PHPH domainDomainInterproscan

 InterPro
InterPro termTypeDescriptionSource
IPR001164
all species →		DomainArf GTPase activating proteinInterproscan
IPR037278
all species →		Homologous_superfamilyARFGAP/RecO-like zinc fingerInterproscan
IPR001849
all species →		DomainPleckstrin homology domainInterproscan
IPR011993
all species →		Homologous_superfamilyPH-like domain superfamilyInterproscan
IPR013761
all species →		Homologous_superfamilySterile alpha motif/pointed domain superfamilyInterproscan
IPR052227
all species →		FamilyArf-GAP with Rho-GAP domain, ANK repeat and PH domain-containing proteinInterproscan
IPR001660
all species →		DomainSterile alpha motif domainInterproscan
IPR038508
all species →		Homologous_superfamilyArfGAP domain superfamilyInterproscan

 PANTHER
PANTHER termDescriptionSource
PTHR45899
all species →		RHO GTPASE ACTIVATING PROTEIN AT 15B, ISOFORM CInterproscan

 Gene Ontology
GO termCategoryDescriptionSource
GO:0005096
all species →		Molecular FunctionGTPase activator activityInterproscan
GO:0005547
all species →		Molecular Functionphosphatidylinositol-3,4,5-trisphosphate bindingInterproscan
GO:0005737
all species →		Cellular ComponentcytoplasmInterproscan
GO:0005515
all species →		Molecular Functionprotein bindingInterproscan

Search by domain instead of by gene. Any accession above (InterPro, Pfam, PANTHER, GO, KEGG) can be used as a query on the Functional Domain Search page, which searches all 148 annotated genomes at once.
 KEGG pathway
No KEGG orthology assignment for evm.model.Ap5.2578.

Searching by KO or pathway ID across all species is available on the KEGG Pathway page.
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