Genomic Location: Ap5:28597249...28600645
NR annotation: XP_022795900.1, solute carrier family 25 member 36-like [Stylophora pistillata]
Species Astrangia poculata · all data for this species · gene families
| CDS |
| evm.model.Ap5.2814 |
| Transcript |
| evm.model.Ap5.2814 |
| Protein |
| evm.model.Ap5.2814 |
| UniProt accession | Description |
|---|---|
| Q6DG32 | Solute carrier family 25 member 36-A OS=Danio rerio OX=7955 GN=slc25a36a PE=2 SV=1 |
| Q9VQ37 | Mitochondrial carrier protein Rim2 OS=Drosophila melanogaster OX=7227 GN=Rim2 PE=2 SV=2 |
| Q922G0 | Solute carrier family 25 member 36 OS=Mus musculus OX=10090 GN=Slc25a36 PE=2 SV=1 |
| Family type | Membership / link |
|---|---|
| Orthogroup (gene family) | OG0001775 (this species only) |
| Pfam accession | Pfam name | Description | Type | Source |
|---|---|---|---|---|
| PF00153 all species → | Mito_carr | Mitochondrial carrier protein | Repeat | Interproscan |
| InterPro term | Type | Description | Source |
|---|---|---|---|
| IPR018108 all species → | Repeat | Mitochondrial substrate/solute carrier | Interproscan |
| IPR002067 all species → | Family | Mitochondrial carrier protein | Interproscan |
| IPR023395 all species → | Homologous_superfamily | Mitochondrial carrier domain superfamily | Interproscan |
| IPR049562 all species → | Family | Solute carrier family 25 member 33/36-like | Interproscan |
| PANTHER term | Description | Source |
|---|---|---|
| PTHR45829 all species → | MITOCHONDRIAL CARRIER PROTEIN RIM2 | Interproscan |
| GO term | Category | Description | Source |
|---|---|---|---|
| GO:0055085 all species → | Biological Process | transmembrane transport | Interproscan |
| GO:0000002 all species → | Biological Process | mitochondrial genome maintenance | Interproscan |
| GO:0005739 all species → | Cellular Component | mitochondrion | Interproscan |
| GO:0015218 all species → | Molecular Function | pyrimidine nucleotide transmembrane transporter activity | Interproscan |
| GO:1990519 all species → | Biological Process | pyrimidine nucleotide import into mitochondrion | Interproscan |
| KO | Enzyme | Enzyme ID | Pathway | Map ID | Source |
|---|---|---|---|---|---|
| K15116 | SLC25A33_36, RIM2; solute carrier family 25, member 33/36 | - | Transporters | ko02000 | deepkoala |
Transcript abundance of evm.model.Ap5.2814 across 49 RNA-seq samples of Astrangia poculata. This gene has no row in the species' RNA-seq expression matrix, so every value below is shown as zero — the matrix simply does not cover this transcript. Values are TPM (transcripts per million) from the StringTie quantification; one bar is one sample, grouped and coloured by condition, sorted by expression within each group.
| Condition | Samples | TPM > 0 | Mean TPM | Max TPM | Mean, relative to max |
|---|---|---|---|---|---|
| whole organism · cold control | 14 | 0 | 0.00 | 0.00 | |
| whole organism · heat control | 12 | 0 | 0.00 | 0.00 | |
| whole organism · cold challenge | 12 | 0 | 0.00 | 0.00 | |
| whole organism · heat challenge | 11 | 0 | 0.00 | 0.00 |
Source: CnidoSite RNA-seq expression matrices (APOCU_TPM,
StringTie quantification over 49 runs), joined to SRA sample
metadata. Samples whose tissue/treatment is not recorded in the source metadata are grouped
by the descriptor carried in the expression matrix itself.
