Gene detail

Detailed information of evm.model.Ap5.2822.2.5f15e773 in Astrangia poculata

Genomic Location: Ap5:28756480...28764471
NR annotation: XP_020604586.1, protein kinase C-binding protein NELL1-like [Orbicella faveolata]
Species abbreviation APOCU · all data for this species · gene families

Gene Structure

More details in JBrowse

Sequence

CDS

Transcript

Protein

UniProt (Swiss-Prot top hit)

UniProt accession	Description
Q6W4X9	Mucin-6 OS=Homo sapiens OX=9606 GN=MUC6 PE=1 SV=3
Q700K0	SCO-spondin OS=Rattus norvegicus OX=10116 GN=Sspo PE=2 SV=1

Gene family

Family type	Membership / link
Orthogroup (gene family)	OG0003957 (this species only)

Pfam domain

Pfam accession	Pfam name	Description	Type	Source
PF01826 all species →	TIL	Trypsin Inhibitor like cysteine rich domain	Domain	Interproscan
PF00093 all species →	VWC	von Willebrand factor type C domain	Domain	Interproscan

InterPro

InterPro term	Type	Description	Source
IPR013320 all species →	Homologous_superfamily	Concanavalin A-like lectin/glucanase domain superfamily	Interproscan
IPR001007 all species →	Domain	VWFC domain	Interproscan
IPR002919 all species →	Domain	Trypsin Inhibitor-like, cysteine rich domain	Interproscan
IPR048287 all species →	Domain	Thrombospondin-like, N-terminal domain	Interproscan
IPR051586 all species →	Family	Protein kinase C-binding NELL	Interproscan

PANTHER

PANTHER term	Description	Source
PTHR24042 all species →	NEL HOMOLOG	Interproscan

Gene Ontology

GO term	Category	Description	Source
GO:0005515 all species →	Molecular Function	protein binding	Interproscan
GO:0005615 all species →	Cellular Component	extracellular space	Interproscan
GO:0008201 all species →	Molecular Function	heparin binding	Interproscan

Search by domain instead of by gene. Any accession above (InterPro, Pfam, PANTHER, GO, KEGG) can be used as a query on the Functional Domain Search page, which searches all 148 annotated genomes at once.

KEGG pathway

No KEGG orthology assignment for evm.model.Ap5.2822.2.5f15e773.

Searching by KO or pathway ID across all species is available on the KEGG Pathway page.