Detailed information of evm.model.Ap5.383 in Astrangia poculata

Genomic Location: Ap5:4194171...4194632
NR annotation: XP_020613964.1, myosin-2 essential light chain-like [Orbicella faveolata]
Species abbreviation APOCU · all data for this species · gene families


 Gene Structure
More details in JBrowse  Sequence
CDS
Transcript
Protein
 UniProt (Swiss-Prot top hit)
UniProt accessionDescription
Q9XVI9Myosin-2 essential light chain OS=Caenorhabditis elegans OX=6239 GN=mlc-5 PE=1 SV=1
P02605Myosin light chain 3, skeletal muscle isoform OS=Gallus gallus OX=9031 PE=1 SV=3
P02604Myosin light chain 1, skeletal muscle isoform OS=Gallus gallus OX=9031 PE=1 SV=3
 Gene family
Family typeMembership / link
Orthogroup (gene family)OG0000606 (this species only)

 Pfam domain
Pfam accessionPfam nameDescriptionTypeSource
PF13833
all species →		EF-hand_8EF-hand domain pairDomainInterproscan

 InterPro
InterPro termTypeDescriptionSource
IPR002048
all species →		DomainEF-hand domainInterproscan
IPR050230
all species →		FamilyCalcium-Regulated Muscle Contraction and Cellular ProcessInterproscan
IPR011992
all species →		Homologous_superfamilyEF-hand domain pairInterproscan

 PANTHER
PANTHER termDescriptionSource
PTHR23048
all species →		MYOSIN LIGHT CHAIN 1, 3Interproscan

 Gene Ontology
GO termCategoryDescriptionSource
GO:0005509
all species →		Molecular Functioncalcium ion bindingInterproscan
GO:0016460
all species →		Cellular Componentmyosin II complexInterproscan

Search by domain instead of by gene. Any accession above (InterPro, Pfam, PANTHER, GO, KEGG) can be used as a query on the Functional Domain Search page, which searches all 148 annotated genomes at once.
 KEGG pathway
KOEnzymeEnzyme IDPathwayMap IDSource
K12751MYL6; myosin light chain 6-Exosomeko04147deepkoala

Searching by KO or pathway ID across all species is available on the KEGG Pathway page.
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