Gene detail

Detailed information of evm.model.Ap5.54 in Astrangia poculata

Genomic Location: Ap5:628807...631819
NR annotation: KAJ7376317.1, Ragulator complex protein lamtor1 [Desmophyllum pertusum]
Species abbreviation APOCU · all data for this species · gene families

Gene Structure

More details in JBrowse

Sequence

CDS

Transcript

Protein

UniProt (Swiss-Prot top hit)

UniProt accession	Description
Q9CQ22	Ragulator complex protein LAMTOR1 OS=Mus musculus OX=10090 GN=Lamtor1 PE=1 SV=1
Q6IAA8	Ragulator complex protein LAMTOR1 OS=Homo sapiens OX=9606 GN=LAMTOR1 PE=1 SV=2
Q5R766	Ragulator complex protein LAMTOR1 OS=Pongo abelii OX=9601 GN=LAMTOR1 PE=2 SV=1

Gene family

Family type	Membership / link
Orthogroup (gene family)	OG0008150 (this species only)

Pfam domain

Pfam accession	Pfam name	Description	Type	Source
PF15454 all species →	LAMTOR	Late endosomal/lysosomal adaptor and MAPK and MTOR activator	Family	Interproscan

InterPro

InterPro term	Type	Description	Source
IPR028209 all species →	Family	LAMTOR1/MEH1	Interproscan

PANTHER

PANTHER term	Description	Source
PTHR13401 all species →	RAGULATOR COMPLEX PROTEIN LAMTOR1	Interproscan

Gene Ontology

GO term	Category	Description	Source
GO:0001919 all species →	Biological Process	regulation of receptor recycling	Interproscan
GO:0007040 all species →	Biological Process	lysosome organization	Interproscan
GO:0016197 all species →	Biological Process	endosomal transport	Interproscan
GO:0031902 all species →	Cellular Component	late endosome membrane	Interproscan
GO:0032008 all species →	Biological Process	positive regulation of TOR signaling	Interproscan
GO:0042632 all species →	Biological Process	cholesterol homeostasis	Interproscan
GO:0043410 all species →	Biological Process	positive regulation of MAPK cascade	Interproscan
GO:0045121 all species →	Cellular Component	membrane raft	Interproscan
GO:0071230 all species →	Biological Process	cellular response to amino acid stimulus	Interproscan
GO:0071986 all species →	Cellular Component	Ragulator complex	Interproscan
GO:0005085 all species →	Molecular Function	guanyl-nucleotide exchange factor activity	Interproscan
GO:0005764 all species →	Cellular Component	lysosome	Interproscan
GO:0060090 all species →	Molecular Function	molecular adaptor activity	Interproscan

Search by domain instead of by gene. Any accession above (InterPro, Pfam, PANTHER, GO, KEGG) can be used as a query on the Functional Domain Search page, which searches all 148 annotated genomes at once.

KEGG pathway

KO	Enzyme	Enzyme ID	Pathway	Map ID	Source
K20397	LAMTOR1; ragulator complex protein LAMTOR1	-	mTOR signaling pathway	ko04150	deepkoala

Searching by KO or pathway ID across all species is available on the KEGG Pathway page.