Gene detail

Detailed information of evm.model.Ap5.557 in Astrangia poculata

Genomic Location: Ap5:5934550...5943715
NR annotation: XP_020629832.1, F-box only protein 8-like [Orbicella faveolata]
Species Astrangia poculata · all data for this species · gene families

Gene Structure

More details in JBrowse

Sequence

CDS

Transcript

Protein

UniProt (Swiss-Prot top hit)

UniProt accession	Description
Q9QZN3	F-box only protein 8 OS=Mus musculus OX=10090 GN=Fbxo8 PE=2 SV=2
Q5E9G6	F-box only protein 8 OS=Bos taurus OX=9913 GN=FBXO8 PE=2 SV=1
Q9NRD0	F-box only protein 8 OS=Homo sapiens OX=9606 GN=FBXO8 PE=1 SV=1

Gene family

Family type	Membership / link
Orthogroup (gene family)	OG0007704 (this species only)

Pfam domain

Pfam accession	Pfam name	Description	Type	Source
PF12937 all species →	F-box-like	F-box-like	Domain	Interproscan
PF01369 all species →	Sec7	Sec7 domain	Domain	Interproscan

InterPro

InterPro term	Type	Description	Source
IPR035999 all species →	Homologous_superfamily	Sec7 domain superfamily	Interproscan
IPR023394 all species →	Homologous_superfamily	Sec7, C-terminal domain superfamily	Interproscan
IPR000904 all species →	Domain	Sec7 domain	Interproscan
IPR001810 all species →	Domain	F-box domain	Interproscan
IPR036047 all species →	Homologous_superfamily	F-box-like domain superfamily	Interproscan
IPR048003 all species →	Domain	F-box only protein 8, F-box domain	Interproscan

PANTHER

PANTHER term	Description	Source
PTHR10663 all species →	GUANYL-NUCLEOTIDE EXCHANGE FACTOR	Interproscan

Gene Ontology

GO term	Category	Description	Source
GO:0005085 all species →	Molecular Function	guanyl-nucleotide exchange factor activity	Interproscan
GO:0032012 all species →	Biological Process	regulation of ARF protein signal transduction	Interproscan
GO:0005515 all species →	Molecular Function	protein binding	Interproscan

Search by domain instead of by gene. Any accession above (InterPro, Pfam, PANTHER, GO, KEGG) can be used as a query on the Functional Domain Search page, which searches all 148 annotated genomes at once.

KEGG pathway

KO	Enzyme	Enzyme ID	Pathway	Map ID	Source
K10294	FBXO8; F-box protein 8	-	Ubiquitin system	ko04121	deepkoala

Searching by KO or pathway ID across all species is available on the KEGG Pathway page.