Detailed information of evm.model.Ap5.844 in Astrangia poculata

Genomic Location: Ap5:8700545...8725301
NR annotation: KAJ7385683.1, Nuclear pore complex protein Nup98-Nup96 [Desmophyllum pertusum]
Species Astrangia poculata · all data for this species · gene families


 Gene Structure
More details in JBrowse  Sequence
CDS
Transcript
Protein
 UniProt (Swiss-Prot top hit)
No Swiss-Prot hit above the reporting threshold for this gene.
 Gene family
Family typeMembership / link
Orthogroup (gene family)OG0002719 (this species only)

 Pfam domain
Pfam accessionPfam nameDescriptionTypeSource
PF13920
all species →		zf-C3HC4_3Zinc finger, C3HC4 type (RING finger)DomainInterproscan
PF02493
all species →		MORNMORN repeatRepeatInterproscan

 InterPro
InterPro termTypeDescriptionSource
IPR013083
all species →		Homologous_superfamilyZinc finger, RING/FYVE/PHD-typeInterproscan
IPR001841
all species →		DomainZinc finger, RING-typeInterproscan
IPR003409
all species →		RepeatMORN repeatInterproscan

 PANTHER
PANTHER termDescriptionSource
PTHR46613
all species →		RADIAL SPOKE HEAD 10 HOMOLOG B-RELATEDInterproscan

 Gene Ontology
No Gene Ontology signature was detected for evm.model.Ap5.844. This gene does have a gene model — the search simply returned no hit.
Search by domain instead of by gene. Any accession above (InterPro, Pfam, PANTHER, GO, KEGG) can be used as a query on the Functional Domain Search page, which searches all 148 annotated genomes at once.
 KEGG pathway
No KEGG orthology assignment for evm.model.Ap5.844.

Searching by KO or pathway ID across all species is available on the KEGG Pathway page.
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