Detailed information of evm.model.Ap5.857 in Astrangia poculata

Genomic Location: Ap5:8927165...8928091
NR annotation: XP_020603481.1, tRNA methyltransferase 10 homolog A-like [Orbicella faveolata]
Species Astrangia poculata · all data for this species · gene families


 Gene Structure
More details in JBrowse  Sequence
CDS
Transcript
Protein
 UniProt (Swiss-Prot top hit)
UniProt accessionDescription
Q66JJ4tRNA methyltransferase 10 homolog A OS=Xenopus tropicalis OX=8364 GN=trmt10a PE=2 SV=1
Q8C1Z8tRNA methyltransferase 10 homolog A OS=Mus musculus OX=10090 GN=Trmt10a PE=2 SV=2
Q4KLI2tRNA methyltransferase 10 homolog A OS=Rattus norvegicus OX=10116 GN=Trmt10a PE=1 SV=1
 Gene family
Family typeMembership / link
Orthogroup (gene family)OG0002140 (this species only)

 Pfam domain
Pfam accessionPfam nameDescriptionTypeSource
PF01746
all species →		tRNA_m1G_MTtRNA (Guanine-1)-methyltransferaseFamilyInterproscan

 InterPro
InterPro termTypeDescriptionSource
IPR016653
all species →		FamilytRNA (guanine(9)-N(1))-methyltransferase TRM10/TRM10AInterproscan
IPR007356
all species →		FamilytRNA (guanine-N1-)-methyltransferase, eukaryoticInterproscan
IPR016009
all species →		DomaintRNA methyltransferase TRMD/TRM10-type domainInterproscan
IPR038459
all species →		Homologous_superfamilytRNA methyltransferase TRM10-type domain superfamilyInterproscan
IPR028564
all species →		DomaintRNA methyltransferase TRM10-type domainInterproscan

 PANTHER
PANTHER termDescriptionSource
PTHR13563
all species →		TRNA (GUANINE-9-) METHYLTRANSFERASEInterproscan

 Gene Ontology
GO termCategoryDescriptionSource
GO:0008168
all species →		Molecular Functionmethyltransferase activityInterproscan
GO:0000049
all species →		Molecular FunctiontRNA bindingInterproscan
GO:0002939
all species →		Biological ProcesstRNA N1-guanine methylationInterproscan
GO:0005634
all species →		Cellular ComponentnucleusInterproscan
GO:0005654
all species →		Cellular ComponentnucleoplasmInterproscan
GO:0009019
all species →		Molecular Functionobsolete tRNA (guanine-N1-)-methyltransferase activityInterproscan

Search by domain instead of by gene. Any accession above (InterPro, Pfam, PANTHER, GO, KEGG) can be used as a query on the Functional Domain Search page, which searches all 148 annotated genomes at once.
 KEGG pathway
KOEnzymeEnzyme IDPathwayMap IDSource
K15445TRMT10, TRM10, RG9MTD; tRNA (guanine9-N1)-methyltransferaseEC:2.1.1.221
Transfer RNA biogenesisko03016deepkoala

Searching by KO or pathway ID across all species is available on the KEGG Pathway page.
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