Gene detail

Detailed information of evm.model.Ap5.911 in Astrangia poculata

Genomic Location: Ap5:9597725...9599710
NR annotation: XP_020607994.1, metalloproteinase inhibitor 2-like isoform X1 [Orbicella faveolata]
Species abbreviation APOCU · all data for this species · gene families

Gene Structure

More details in JBrowse

Sequence

CDS

Transcript

Protein

UniProt (Swiss-Prot top hit)

UniProt accession	Description
Q9TTY1	Metalloproteinase inhibitor 2 OS=Canis lupus familiaris OX=9615 GN=TIMP2 PE=2 SV=2
Q9W6B4	Metalloproteinase inhibitor 3 OS=Scyliorhinus torazame OX=75743 GN=TIMP3 PE=2 SV=1
Q60453	Metalloproteinase inhibitor 2 (Fragment) OS=Cricetulus longicaudatus OX=10030 GN=TIMP2 PE=2 SV=1

Gene family

Family type	Membership / link
Orthogroup (gene family)	OG0013217 (this species only)

Pfam domain

Pfam accession	Pfam name	Description	Type	Source
PF00965 all species →	TIMP	Tissue inhibitor of metalloproteinase	Domain	Interproscan

InterPro

InterPro term	Type	Description	Source
IPR001134 all species →	Domain	Netrin domain	Interproscan
IPR001820 all species →	Family	Protease inhibitor I35 (TIMP)	Interproscan
IPR008993 all species →	Homologous_superfamily	Tissue inhibitor of metalloproteinases-like, OB-fold	Interproscan
IPR027465 all species →	Homologous_superfamily	Proteinase inhibitor I35b (TIMP), C-terminal	Interproscan

PANTHER

PANTHER term	Description	Source
PTHR11844 all species →	METALLOPROTEASE INHIBITOR	Interproscan

Gene Ontology

GO term	Category	Description	Source
GO:0005515 all species →	Molecular Function	protein binding	Interproscan
GO:0002020 all species →	Molecular Function	protease binding	Interproscan
GO:0005615 all species →	Cellular Component	extracellular space	Interproscan
GO:0008191 all species →	Molecular Function	metalloendopeptidase inhibitor activity	Interproscan
GO:0010033 all species →	Biological Process	obsolete response to organic substance	Interproscan
GO:0010951 all species →	Biological Process	negative regulation of endopeptidase activity	Interproscan
GO:0031012 all species →	Cellular Component	extracellular matrix	Interproscan
GO:0051045 all species →	Biological Process	negative regulation of membrane protein ectodomain proteolysis	Interproscan

Search by domain instead of by gene. Any accession above (InterPro, Pfam, PANTHER, GO, KEGG) can be used as a query on the Functional Domain Search page, which searches all 148 annotated genomes at once.

KEGG pathway

No KEGG orthology assignment for evm.model.Ap5.911.

Searching by KO or pathway ID across all species is available on the KEGG Pathway page.