Detailed information of evm.model.Ap5.923 in Astrangia poculata

Genomic Location: Ap5:9678038...9693818
NR annotation: KAJ7363327.1, Sister chromatid cohesion protein PDS5 A [Desmophyllum pertusum]
Species Astrangia poculata · all data for this species · gene families


 Gene Structure
More details in JBrowse  Sequence
CDS
Transcript
Protein
 UniProt (Swiss-Prot top hit)
UniProt accessionDescription
Q9NTI5Sister chromatid cohesion protein PDS5 homolog B OS=Homo sapiens OX=9606 GN=PDS5B PE=1 SV=1
Q4VA53Sister chromatid cohesion protein PDS5 homolog B OS=Mus musculus OX=10090 GN=Pds5b PE=1 SV=1
Q6TRW4Sister chromatid cohesion protein PDS5 homolog B OS=Rattus norvegicus OX=10116 GN=Pds5b PE=1 SV=2
 Gene family
Family typeMembership / link
Orthogroup (gene family)OG0003756 (this species only)

 Pfam domain
Pfam accessionPfam nameDescriptionTypeSource
PF20168
all species →		PDS5Sister chromatid cohesion protein PDS5 proteinRepeatInterproscan

 InterPro
InterPro termTypeDescriptionSource
IPR039776
all species →		FamilySister chromatid cohesion protein Pds5Interproscan

 PANTHER
PANTHER termDescriptionSource
PTHR12663
all species →		ANDROGEN INDUCED INHIBITOR OF PROLIFERATION AS3 / PDS5-RELATEDInterproscan

 Gene Ontology
GO termCategoryDescriptionSource
GO:0000785
all species →		Cellular ComponentchromatinInterproscan
GO:0005634
all species →		Cellular ComponentnucleusInterproscan
GO:0006281
all species →		Biological ProcessDNA repairInterproscan
GO:0007064
all species →		Biological Processmitotic sister chromatid cohesionInterproscan

Search by domain instead of by gene. Any accession above (InterPro, Pfam, PANTHER, GO, KEGG) can be used as a query on the Functional Domain Search page, which searches all 148 annotated genomes at once.
 KEGG pathway
No KEGG orthology assignment for evm.model.Ap5.923.

Searching by KO or pathway ID across all species is available on the KEGG Pathway page.
TOP